| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4187 |
|---|
| Symbol | |
|---|
| ID | 5192564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4685878 |
|---|
| End bp | 4686660 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640588664 |
|---|
| Product | methionine aminopeptidase |
|---|
| Protein accession | YP_001269495 |
|---|
| Protein GI | 148549393 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.896939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CCATCAAGAC CGCAGAAGAC ATCGAGAAGA TGCGCATCGC TGGCCGCCTG
GCCGCCGAAG TGCTGGAAAT GATCGAAGAA CACGTCAAGC CCGGTGTCAC CACCGAAGAG
CTCGACCGCC TGTGCCACGA TTATATCGTC AAGGTTCAGC AGGCCATCCC GGCACCGCTC
AACTACAAGG GCTACCCGAA GTCGATCTGC ACCTCGATCA ACCATGTGGT CTGCCACGGC
ATCCCCAACG ACAAGCCGCT CAAGGACGGT GACACGCTCA ATATCGACGT CACCGTGATC
AAGGACGGCT ACCACGGCGA CACCAGCCGC ATGTTCCACG TCGGTAACGT GCCGGTCTGG
GCCGAGCGCC TGTCCAAGGT CACCCAGGAA TGCATGTACA AGGCCATCGA GCTGGTCAAG
CCGGGCTGCC GCCTGGGCGA CATCGGTGAA GTGATCCAGA AGCACGCGGA AAAGAACGGC
TTCTCGGTAG TGCGCGAGTT CTGCGGTCAT GGCATCGGCA AAGTGTTCCA TGAAGAGCCG
CAGATCCTCC ACTACGGCCG CGCGGGCACG GGCATGGAGC TGAAGGAAGG CATGACCTTC
ACCATCGAGC CGATGATCAA CCAAGGCAAG GCCGACACCA AGGTGCTGGG CGACGGCTGG
ACCGCCATCA CCAAAGACCG CAAGCTCTCG GCCCAGTGGG AACACACTTT GGTGGTGACT
GCGACTGGCT ACGAGATCTT CACCCTGCGC AAGGACGACA CCATCCCGCG CACTTCGGCC
TGA
|
|---|
| Protein sequence | MTVTIKTAED IEKMRIAGRL AAEVLEMIEE HVKPGVTTEE LDRLCHDYIV KVQQAIPAPL
NYKGYPKSIC TSINHVVCHG IPNDKPLKDG DTLNIDVTVI KDGYHGDTSR MFHVGNVPVW
AERLSKVTQE CMYKAIELVK PGCRLGDIGE VIQKHAEKNG FSVVREFCGH GIGKVFHEEP
QILHYGRAGT GMELKEGMTF TIEPMINQGK ADTKVLGDGW TAITKDRKLS AQWEHTLVVT
ATGYEIFTLR KDDTIPRTSA
|
|---|
| |