| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4172 |
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| Symbol | rnhB |
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| ID | 5192777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4670947 |
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| End bp | 4671570 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588649 |
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| Product | ribonuclease HII |
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| Protein accession | YP_001269480 |
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| Protein GI | 148549378 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.709481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTG GACTGGACTT CAACCTGGTA GAAGACCTGG TCGCCGGCGT TGACGAAGTG
GGTCGTGGCC CGCTGTGTGG CGCGGTGGTA ACGGCGGCCG TGATTCTTGA TCCCGCGCGG
CCGATTCTCG GTCTGAACGA TTCGAAGAAA CTCACCGAAG CCAGGCGTGA GGCGCTGTTC
GACGAGATCT GCGAAAAGGC CTTGAGCTTC TGCATCGCCC GTGCCGAAGT CGAGGAAATT
GACAGCCTGA ACATCCTGCA GGCCACCATG CTGGCCATGC AGCGGGCAGT GGAGGGCTTG
CACATTACGC CGAAGCTGGC CCTGATCGAT GGCAATCGCT GCCCGAAGCT GGCGGTGCCA
GCAGCACCGG TGGTCAAGGG GGATAGCCAG GTGCCGGCCA TTGCGGCGGC ATCGATCCTG
GCCAAGGTGA CCCGTGATCG GGAAATGAGT GCGTTCGAAC TGATCTACCC GGGTTATGGC
ATTGGCGGGC ACAAGGGCTA CCCGACCCCG GTGCATCTCG AGGCCTTGGC GCGCCTTGGG
CCTACGCCCA TTCATCGGCG TTCCTTCGCC CCGGTGCGGG CGGCTTGGGA AGTGCGCGAA
GGCGTCACCG ATTCCCTGAT CTGA
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| Protein sequence | MQIGLDFNLV EDLVAGVDEV GRGPLCGAVV TAAVILDPAR PILGLNDSKK LTEARREALF
DEICEKALSF CIARAEVEEI DSLNILQATM LAMQRAVEGL HITPKLALID GNRCPKLAVP
AAPVVKGDSQ VPAIAAASIL AKVTRDREMS AFELIYPGYG IGGHKGYPTP VHLEALARLG
PTPIHRRSFA PVRAAWEVRE GVTDSLI
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