Gene Pput_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4170 
Symbol 
ID5193497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4666182 
End bp4667135 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID640588647 
Productacetyl-CoA carboxylase carboxyltransferase subunit alpha 
Protein accessionYP_001269478 
Protein GI148549376 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATGA ACCCGAATTT CCTCGACTTC GAACAGCCGA TTGCCGACCT GCAAGCCAAG 
ATCGAAGGCC TGCGCCTGGT GGGCAACGAC AACTCGCTGA ACATCAGCGA TGAAATTGCC
CGTCTGCAAG ACAAGAGCAA CACCCTGACC GAAAGCATTT TCGGCAACCT GACCAGCTGG
CAGATCGCCC GCCTGGCCCG TCACCCGCGT CGTCCATACA CCCTGGACTA CCTGGAGCAC
ATCTTCACCG AGTTCGAAGA GCTGCACGGG GACCGTCACT TCTCTGACGA CGCCGCCATC
GTGGGTGGTA CTGCGCGTCT GGACGGCAAG CCGGTCATGG TCATTGGCCA CCAGAAGGGC
CGTGAAGTGC GCGAGAAAGT GCGTCGCAAC TTCGGCATGC CGCGCCCGGA AGGTTACCGC
AAGGCCTGTC GCCTGATGGA AATGGCCGAA CGCTTCAAGA TGCCGATCCT GACCTTCATC
GACACGCCGG GCGCCTACCC GGGCATCGAC GCCGAAGAGC GCAACCAGAG TGAAGCCATC
GCCTGGAACC TGCGGGTCAT GGCACGCCTG AAAACCCCGA TCATCGCTAC CGTGATCGGT
GAGGGTGGTT CCGGTGGGGC ACTGGCCATT GGCGTGTGCG ACCAACTGAA CATGCTGCAG
TACTCCACCT ACTCGGTTAT TTCGCCGGAA GGCTGTGCTT CGATTCTGTG GAAAACGGCC
GATAAAGCAG CAGACGCGGC CGAGGCCATG GGCATCACCG CCGAGCGTCT GAAAAGCCTG
AACATTGTAG ACAAGGTCAT CCAGGAGCCG CTGGGCGGCG CCCACCGTGA CCCGGCCCAG
ATGTCCGAAA GCATCCGTGC CGATCTGGTG CAGCAGCTGG ACATGCTCGG CAAGTTCGAC
AACGATGCGC TGTTGGCCCG TCGTTACGAG CGCCTGATGA GCTACGGCCT CTGA
 
Protein sequence
MTMNPNFLDF EQPIADLQAK IEGLRLVGND NSLNISDEIA RLQDKSNTLT ESIFGNLTSW 
QIARLARHPR RPYTLDYLEH IFTEFEELHG DRHFSDDAAI VGGTARLDGK PVMVIGHQKG
REVREKVRRN FGMPRPEGYR KACRLMEMAE RFKMPILTFI DTPGAYPGID AEERNQSEAI
AWNLRVMARL KTPIIATVIG EGGSGGALAI GVCDQLNMLQ YSTYSVISPE GCASILWKTA
DKAADAAEAM GITAERLKSL NIVDKVIQEP LGGAHRDPAQ MSESIRADLV QQLDMLGKFD
NDALLARRYE RLMSYGL