Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4169 |
Symbol | |
ID | 5193496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4664729 |
End bp | 4666012 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640588646 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001269477 |
Protein GI | 148549375 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.911807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACC TCACTCCTTG GCTCAACGCC CCCACCTGGC ACGTCGCCTT CTCCGGCGGC CTCGACTCCA CCGTCCTCCT GCACCTGCTG GCCGAGTACG CCCGCAACCA CGCATCCCCC CCGCTGCGCG CCATCCATAT CCACCACGGC CTGCAAGCCG CTGCCGACGC CTGGCCCGCC CACTGCCAAG CCATCTGCGA CAATTTCGAC GTTGAACTCC AGGTCATCCA CGTCCAGGTC TCCCCAGGCG CCAGCCTGGA ACAGGCGGCC CGAGAGGCCC GCTATGCCGC CTTCAGGCAA GTGCTCGGCC CGGGCGATAT CCTGTTCACC GGTCAGCACC GCGACGACCA GGCCGAGACC CTGCTGTTCC GCCTGTTGCG CGGCGCCGGC CTGCGTGGCC TGGCGGCAAT GCCGGGGCAG CGGGCGCTGG GGCAGGGCAG CCTGGTCAGG CCGTTACTGG CCTGTTCCCG GCAACATTTG CAGGATTATG CCCAAGCCCA AGGGCTGACC TGGATCGAAG ACCCGTCAAA CGTCGACACA CAATTCGCCC GCAACTACCT GCGCGGCGAA GTGATGCCGC AGTTGCAGCA ACGTTGGCCA CAGGCCAGCC AGAACTTCGC CCGTGCAGCA GAGCATCTGG GCCAGGCGCT GGGTTTGCTG GACGAACTGG CCCAGGAGGA TCTGGCGCTT GCGCGCAAAG GGGCGCCTCT CGCCTGGCCG GGGCTGGATT CCCTCGACCT GGCCGCCCTG CTGGCGTTAT CGCCGGCGCG TCAGCGCAAT GCCTTGCAGT ACTGGCTGAG CCAGCGCACC CGTTTGCCCG ATACCCGGCA CTGGGCCGGC TGGGCAGACC TGCGCGATGC CGCTGCCGAT GCCCGGCCAG TCTGGCGGCT TGCCGATGGA CGGTTGGTGC GTAGCCACGG GCGCATCTGG TGGCTGAGCG GTGATTGGCT ACAGCAACCG ACCGGCTCGC TGCCCTGGCC CGAGCCTGAT GGGCCGTTGC GGTTGCCGGG CAATGGTTGC GTGCGTCTTG TTGGCGCAGC CATGCCGAGC GGGTTGCGTA TTGCCTACCG TCAGGGGGGT GAAATGCTGG CGGTTCCCGG CCGTGGCCGG CGGGACCTCA AGCGCCTGCT CAACGAACAG CAGGTGCCGC ATTTCCTGCG CTCGCGCCTG CCGTTGCTGT ATCACGGCGA ATGCCTGCTG GCGGTGGCCA ACCTGCCCGG GCTGGTGCAG GCGGATTGCC AACTGCACTG GCAGTTACCG ACGAACGCGC AAGGTTTGAG CTGA
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Protein sequence | MINLTPWLNA PTWHVAFSGG LDSTVLLHLL AEYARNHASP PLRAIHIHHG LQAAADAWPA HCQAICDNFD VELQVIHVQV SPGASLEQAA REARYAAFRQ VLGPGDILFT GQHRDDQAET LLFRLLRGAG LRGLAAMPGQ RALGQGSLVR PLLACSRQHL QDYAQAQGLT WIEDPSNVDT QFARNYLRGE VMPQLQQRWP QASQNFARAA EHLGQALGLL DELAQEDLAL ARKGAPLAWP GLDSLDLAAL LALSPARQRN ALQYWLSQRT RLPDTRHWAG WADLRDAAAD ARPVWRLADG RLVRSHGRIW WLSGDWLQQP TGSLPWPEPD GPLRLPGNGC VRLVGAAMPS GLRIAYRQGG EMLAVPGRGR RDLKRLLNEQ QVPHFLRSRL PLLYHGECLL AVANLPGLVQ ADCQLHWQLP TNAQGLS
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