Gene Pput_4169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4169 
Symbol 
ID5193496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4664729 
End bp4666012 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content68% 
IMG OID640588646 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001269477 
Protein GI148549375 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.911807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACC TCACTCCTTG GCTCAACGCC CCCACCTGGC ACGTCGCCTT CTCCGGCGGC 
CTCGACTCCA CCGTCCTCCT GCACCTGCTG GCCGAGTACG CCCGCAACCA CGCATCCCCC
CCGCTGCGCG CCATCCATAT CCACCACGGC CTGCAAGCCG CTGCCGACGC CTGGCCCGCC
CACTGCCAAG CCATCTGCGA CAATTTCGAC GTTGAACTCC AGGTCATCCA CGTCCAGGTC
TCCCCAGGCG CCAGCCTGGA ACAGGCGGCC CGAGAGGCCC GCTATGCCGC CTTCAGGCAA
GTGCTCGGCC CGGGCGATAT CCTGTTCACC GGTCAGCACC GCGACGACCA GGCCGAGACC
CTGCTGTTCC GCCTGTTGCG CGGCGCCGGC CTGCGTGGCC TGGCGGCAAT GCCGGGGCAG
CGGGCGCTGG GGCAGGGCAG CCTGGTCAGG CCGTTACTGG CCTGTTCCCG GCAACATTTG
CAGGATTATG CCCAAGCCCA AGGGCTGACC TGGATCGAAG ACCCGTCAAA CGTCGACACA
CAATTCGCCC GCAACTACCT GCGCGGCGAA GTGATGCCGC AGTTGCAGCA ACGTTGGCCA
CAGGCCAGCC AGAACTTCGC CCGTGCAGCA GAGCATCTGG GCCAGGCGCT GGGTTTGCTG
GACGAACTGG CCCAGGAGGA TCTGGCGCTT GCGCGCAAAG GGGCGCCTCT CGCCTGGCCG
GGGCTGGATT CCCTCGACCT GGCCGCCCTG CTGGCGTTAT CGCCGGCGCG TCAGCGCAAT
GCCTTGCAGT ACTGGCTGAG CCAGCGCACC CGTTTGCCCG ATACCCGGCA CTGGGCCGGC
TGGGCAGACC TGCGCGATGC CGCTGCCGAT GCCCGGCCAG TCTGGCGGCT TGCCGATGGA
CGGTTGGTGC GTAGCCACGG GCGCATCTGG TGGCTGAGCG GTGATTGGCT ACAGCAACCG
ACCGGCTCGC TGCCCTGGCC CGAGCCTGAT GGGCCGTTGC GGTTGCCGGG CAATGGTTGC
GTGCGTCTTG TTGGCGCAGC CATGCCGAGC GGGTTGCGTA TTGCCTACCG TCAGGGGGGT
GAAATGCTGG CGGTTCCCGG CCGTGGCCGG CGGGACCTCA AGCGCCTGCT CAACGAACAG
CAGGTGCCGC ATTTCCTGCG CTCGCGCCTG CCGTTGCTGT ATCACGGCGA ATGCCTGCTG
GCGGTGGCCA ACCTGCCCGG GCTGGTGCAG GCGGATTGCC AACTGCACTG GCAGTTACCG
ACGAACGCGC AAGGTTTGAG CTGA
 
Protein sequence
MINLTPWLNA PTWHVAFSGG LDSTVLLHLL AEYARNHASP PLRAIHIHHG LQAAADAWPA 
HCQAICDNFD VELQVIHVQV SPGASLEQAA REARYAAFRQ VLGPGDILFT GQHRDDQAET
LLFRLLRGAG LRGLAAMPGQ RALGQGSLVR PLLACSRQHL QDYAQAQGLT WIEDPSNVDT
QFARNYLRGE VMPQLQQRWP QASQNFARAA EHLGQALGLL DELAQEDLAL ARKGAPLAWP
GLDSLDLAAL LALSPARQRN ALQYWLSQRT RLPDTRHWAG WADLRDAAAD ARPVWRLADG
RLVRSHGRIW WLSGDWLQQP TGSLPWPEPD GPLRLPGNGC VRLVGAAMPS GLRIAYRQGG
EMLAVPGRGR RDLKRLLNEQ QVPHFLRSRL PLLYHGECLL AVANLPGLVQ ADCQLHWQLP
TNAQGLS