| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4162 |
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| Symbol | |
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| ID | 5192634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4658369 |
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| End bp | 4659265 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588639 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001269470 |
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| Protein GI | 148549368 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.265512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.711373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC GATGGGAAGG CATCGACGAA TTTGTCGCCG TGGCCGAATC GGGCCAGTTC
ACTGCCGCCG CCGAACGCCT GGGGGTTTCC TCATCGCACA TCAGCCGGCA GATCGCCCGG
CTGGAAGACC GCCTGCAAAC GCGCCTGCTG TATCGCAGTA CCCGCCGGGT AACCCTGAGC
GAAGCCGGGC AGACCTTCCT GCAGCATTGC CAACGCTTGC AGGATGGCCG CGAGGAAGCG
CTGCGCGCCA TGGGCGACCT GGCCAGCGAA CCCAAGGGCT TGTTGCGCAT GACGTGCGCA
GTGGCCTACG GCGAGCGCTT CATCGTGCCG TTGGTGACGC GATTCATGGC GCTGTACCCG
CAGCTGCGCG TGGATGTGGA GCTGAGCAAC CACACCCTCG ACCTGCTGCA TGAAGGCATG
GACCTGGCCA TCCGCCTGGG CCGCCTGGCC GACTCTCGCC TGGTGGCTAC CCGCCTGGCG
CCAAGGCGCA TGTACCTGTG CGCCTCGCCG GCCTATCTTG AGCACTATGG CCGGCCACAC
AGCCTGTCGG AGCTGGCGCG GCACAATTGC CTGGTGGGGA GTTCGGACTT GTGGGCGCTA
CAGCAGGATG GCCGTGAGAT CAGCCAGCGG GTACAGGGTA ACTGGCGCTG CAACAGTGGC
CAGGCAGTGC TGGATGCGGC GCTGCAAGGG ATCGGGTTGT GCCAGTTGCC GGATTACTAC
GTGCTGGAAC ACCTGAACAG TGGTGCGCTG GTGTCGCTGC TGGAGGCGCA CCAACCGCCG
AATACGGCGG TGTGGGCGCT GTATCCGCAG CAGAGGCACC TGTCGCCGAA GGTACGGCGG
CTGGTGGATT ACCTGAAGGA GGGGTTGGCG GGGTTGCCGG AGTATCGTTT CGGCTGA
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| Protein sequence | MSSRWEGIDE FVAVAESGQF TAAAERLGVS SSHISRQIAR LEDRLQTRLL YRSTRRVTLS
EAGQTFLQHC QRLQDGREEA LRAMGDLASE PKGLLRMTCA VAYGERFIVP LVTRFMALYP
QLRVDVELSN HTLDLLHEGM DLAIRLGRLA DSRLVATRLA PRRMYLCASP AYLEHYGRPH
SLSELARHNC LVGSSDLWAL QQDGREISQR VQGNWRCNSG QAVLDAALQG IGLCQLPDYY
VLEHLNSGAL VSLLEAHQPP NTAVWALYPQ QRHLSPKVRR LVDYLKEGLA GLPEYRFG
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