| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4159 |
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| Symbol | ispF |
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| ID | 5192655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4655700 |
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| End bp | 4656173 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588636 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001269467 |
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| Protein GI | 148549365 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.172837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTG GCCACGGCTA CGATGTGCAC CGTTTCTGCG ACGGTGATTT CATTACCCTG
GGCGGGGTGC GTATCCCCCA CAAATACGGC CTGTTGGCCC ATTCTGACGG TGACGTGCTG
CTGCACGCCC TGAGCGATGC CTTGCTTGGC GCTGCGGCGC TGGGCGACAT CGGCAAGCAC
TTCCCTGACA CTGACCCGCA GTTCAAGGGT GCTGACAGCC GCGCGCTGCT GCGTCATGTG
GTCGGCATCG TCAAGGCCAA GGGCTGGAAG GTCGGCAACG TTGACGCCAC CATCGTCGCC
CAGGCACCGA AAATGGCCCC GCACATCGAA ACCATGCGCC AGCTGATCGC CGAAGACCTG
CAGGTCGAGC TCGACCAGGT CAATGTCAAG GCCACCACCA CAGAGAAGCT TGGCTTTACC
GGCCGCGAGG AGGGCATTGC CGTGCATTCG GTCGCCCTGC TGCTGCCAGC ATGA
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| Protein sequence | MRIGHGYDVH RFCDGDFITL GGVRIPHKYG LLAHSDGDVL LHALSDALLG AAALGDIGKH
FPDTDPQFKG ADSRALLRHV VGIVKAKGWK VGNVDATIVA QAPKMAPHIE TMRQLIAEDL
QVELDQVNVK ATTTEKLGFT GREEGIAVHS VALLLPA
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