| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4152 |
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| Symbol | |
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| ID | 5192910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4647450 |
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| End bp | 4650023 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588629 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001269460 |
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| Protein GI | 148549358 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.121513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTC TTTCCGACCA CACACCAATG ATGCAGCAGT ACTGGAAGCT GAAAAACCAG
CACCCGGACC AGCTGATGTT CTACCGCATG GGCGACTTCT ACGAGATCTT CTACGAAGAT
GCGAAAAAGG CCGCGAAACT GCTGGATATC ACCCTGACCG CCCGCGGTCA GTCGGCCGGC
CAGTCCATCC CCATGTGCGG GATTCCGTTC CATTCGCTGG AAGGCTACCT GGCCAAGCTG
GTCAAGCTTG GCGAGTCGGT GGTGATCTGT GAGCAGATCG GCGACCCCGC CACCAGCAAG
GGCCCGGTGG AGCGCCAGGT GGTGCGCATC ATCACCCCCG GCACAGTCAG TGACGAGGCA
CTGCTCGACG AGCGCCGCGA CAACCTGATT GCCGCACTGC TCGGTGACGA GCGCCTGTTC
GGCCTGGCGG TACTGGACAT CACCAGCGGC AATTTCAGCG TGCAGGAGAT CAAGGGCTGG
GAAAACCTGC TGGCCGAACT CGAGCGCCTG AACCCGGTCG AGCTGTTGAT CCCCGACGAC
TGGCCACGGG ACCTGCCTGC GGAGAAACGC CCAGGCGCCC GCCGCCGCGC ACCCTGGGAC
TTCGACCGCG ACTCGGCACG CAAGGCCCTG TGCCAGCAGT TCGCGACCAA GGACCTCAAG
GGCTTCGGCT GCGACAAGCT GACCCTGGCC ATCGGCGCCG CCGGCTGCCT GCTGACCTAT
GCCAAGGAAA CCCAGCGCAC CGCCCTGCCG CACCTGCGCA GCCTGCGCCA CGAGCGTCTG
GACGATACAG TCATCCTCGA TGGGGCCAGC CGCCGCAACC TGGAGCTGGA CATCAACCTG
GCCGGTGGGC GCGACAACAC CCTGCAATCG GTGATCGACC GCTGCCAGAC CGCCATGGCC
AGCCGCCTGC TGAGCCGCTG GCTGAACCGC CCGCTGCGCG ACCTCAAGGT GCTGCAAGCA
CGCCAGGACT CGATCCGCTG CCTGCTCGAC AGCTACCGCT TCGAAAAGCT GCAGCCGCAG
TTGAAGGAAA TTGGCGATAT CGAGCGGATC CTCGCCCGTA TTGGCCTGCG CAATGCCCGC
CCGCGCGACC TGGCACGCCT GCGCGATGCG CTGGGCGCGC TGCCAGAACT GCAGAACGCC
ATGACCGAGC TCGAAGCGCC GCACCTGGCG CGTCTGGCGG CCATTACCGG TACCTATCCG
GAGCTGGCCA GCCTGCTGGA GCGGGCGATC ATCGATAACC CGCCGGCGGT GATCCGCGAC
GGCGGTGTAC TGAAAGCCGG CTATGACAAC GAACTGGACG AGCTGCTGGC AATCAGCGAG
AACGCCGGTC AGTTCCTGAT CGACCTGGAA GCCCGGGAAA AGGCCCGCAC CGGCCTTGCC
AACCTCAAGG TCGGCTACAA CCGCGTGCAC GGCTACTTCA TCGAACTGCC GACCAAGCAG
GCCGAGCAGG CCCCGGGCGA CTACATCCGC CGCCAGACCC TCAAAGGCGC CGAGCGCTTC
ATCACCCCGG AGCTGAAGGC GTTCGAGGAC AAGGCATTGT CGGCCAAGAG CCGCGCCCTG
GCCCGCGAGA AGATGCTCTA CGACGCGCTG CTGGAAACCC TGATCAGCCA CCTGGCACCG
CTGCAGGACA GCGCCGCCGC CCTGGCCGAA CTGGATGTGC TCAGCAACTT GGCCGAGCGC
GCACTGAACC TCGACCTGAG CTGCCCACGC TTTGTCGACG AGCCTTGCCT GCGCATCGAG
CAGGGCCGCC ACCCGGTGGT GGAACAGGTA CTGACCACGC CGTTCGTGGC CAACGACCTG
GGCCTGGACA ACAGTACGCG CATGCTGATC ATCACCGGCC CCAACATGGG CGGTAAGTCG
ACCTACATGC GCCAGACTGC GCTTATCGTG CTCCTGGCCC ACATCGGTAG CTTCGTGCCG
GCAGCCAGCT GCGAGCTGTC GCTGGTCGAC CGCATCTTCA CCCGCATCGG CTCCAGTGAC
GACCTGGCCG GCGGGCGCTC GACCTTCATG GTGGAGATGA GCGAAACCGC CAACATCCTG
CACAACGCCA CCGACCGCAG CCTGGTGCTG ATGGACGAAG TGGGCCGCGG TACCAGCACC
TTCGATGGCC TGTCGCTGGC CTGGGCTGCC GCCGAGCGCC TGGCCCAGCT GCGTGCCTAC
ACACTGTTCG CCACCCACTA CTTCGAACTG ACCGTGCTGC CGGAGAGCGA GCCGCTGGTG
GCCAACGTGC ACCTGAACGC CACCGAGCAC AATGAACGCA TCGTGTTCCT GCACCACGTG
CTACCCGGCC CTGCCAGCCA AAGCTACGGC CTGGCCGTTG CGCAGCTGGC CGGCGTACCG
ACGGCAGTGA TCCAGCGTGC CCGCGAGCAC CTTGGCCGGC TGGAAACCAC CAGCCTGCCC
CATGAGCAGC CTGCGGCCCA CAAGGCCAAG GACGCGCCGC AAGTGCCGCA CCAGAGCGAC
TTGTTTGCCA GCCTGCCTCA TCCAGCCATC GAGAAGCTGG GCAAGCTGCA ACTGGACGAC
ATGACCCCGC GTCAAGCTAT CGAAATGCTA TATCAACTAA AGAACCTGTT ATAA
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| Protein sequence | MSSLSDHTPM MQQYWKLKNQ HPDQLMFYRM GDFYEIFYED AKKAAKLLDI TLTARGQSAG
QSIPMCGIPF HSLEGYLAKL VKLGESVVIC EQIGDPATSK GPVERQVVRI ITPGTVSDEA
LLDERRDNLI AALLGDERLF GLAVLDITSG NFSVQEIKGW ENLLAELERL NPVELLIPDD
WPRDLPAEKR PGARRRAPWD FDRDSARKAL CQQFATKDLK GFGCDKLTLA IGAAGCLLTY
AKETQRTALP HLRSLRHERL DDTVILDGAS RRNLELDINL AGGRDNTLQS VIDRCQTAMA
SRLLSRWLNR PLRDLKVLQA RQDSIRCLLD SYRFEKLQPQ LKEIGDIERI LARIGLRNAR
PRDLARLRDA LGALPELQNA MTELEAPHLA RLAAITGTYP ELASLLERAI IDNPPAVIRD
GGVLKAGYDN ELDELLAISE NAGQFLIDLE AREKARTGLA NLKVGYNRVH GYFIELPTKQ
AEQAPGDYIR RQTLKGAERF ITPELKAFED KALSAKSRAL AREKMLYDAL LETLISHLAP
LQDSAAALAE LDVLSNLAER ALNLDLSCPR FVDEPCLRIE QGRHPVVEQV LTTPFVANDL
GLDNSTRMLI ITGPNMGGKS TYMRQTALIV LLAHIGSFVP AASCELSLVD RIFTRIGSSD
DLAGGRSTFM VEMSETANIL HNATDRSLVL MDEVGRGTST FDGLSLAWAA AERLAQLRAY
TLFATHYFEL TVLPESEPLV ANVHLNATEH NERIVFLHHV LPGPASQSYG LAVAQLAGVP
TAVIQRAREH LGRLETTSLP HEQPAAHKAK DAPQVPHQSD LFASLPHPAI EKLGKLQLDD
MTPRQAIEML YQLKNLL
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