Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4135 |
Symbol | |
ID | 5193840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4637611 |
End bp | 4637949 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640588612 |
Product | hypothetical protein |
Protein accession | YP_001269443 |
Protein GI | 148549341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000649804 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.13565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG CCATCCAACA AAGCCAGGAC AAGCTCGAAG CCCTGCGCCA GGAAGTGATC ACGGCCACCG AGGCATTCCG CGCCAAATCG CGCTTCTATG TCACGCAAAG CGGTAACGGC TGGATTGTCG TCTCTTCCAG CAACAACCGC GTGTACGGCC GCAACACCAG CTACCCGCAG GCTGTCCGTT ATGCGGAGAG CCTTGAGCGT GCGATCGATG CCAAAACCCT CCCGGTGGTG GCCGTGGTGA AGGTCCGCCA GATCGGTGAA AGCGCAACAC GCTGGGTGGC ACTCTTTGCC TTGACGTTGA TCTTGTTGGC TGGGGCGGCG TCGTCATGA
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Protein sequence | MQAAIQQSQD KLEALRQEVI TATEAFRAKS RFYVTQSGNG WIVVSSSNNR VYGRNTSYPQ AVRYAESLER AIDAKTLPVV AVVKVRQIGE SATRWVALFA LTLILLAGAA SS
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