Gene Pput_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4135 
Symbol 
ID5193840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4637611 
End bp4637949 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content60% 
IMG OID640588612 
Producthypothetical protein 
Protein accessionYP_001269443 
Protein GI148549341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000649804 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.13565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAG CCATCCAACA AAGCCAGGAC AAGCTCGAAG CCCTGCGCCA GGAAGTGATC 
ACGGCCACCG AGGCATTCCG CGCCAAATCG CGCTTCTATG TCACGCAAAG CGGTAACGGC
TGGATTGTCG TCTCTTCCAG CAACAACCGC GTGTACGGCC GCAACACCAG CTACCCGCAG
GCTGTCCGTT ATGCGGAGAG CCTTGAGCGT GCGATCGATG CCAAAACCCT CCCGGTGGTG
GCCGTGGTGA AGGTCCGCCA GATCGGTGAA AGCGCAACAC GCTGGGTGGC ACTCTTTGCC
TTGACGTTGA TCTTGTTGGC TGGGGCGGCG TCGTCATGA
 
Protein sequence
MQAAIQQSQD KLEALRQEVI TATEAFRAKS RFYVTQSGNG WIVVSSSNNR VYGRNTSYPQ 
AVRYAESLER AIDAKTLPVV AVVKVRQIGE SATRWVALFA LTLILLAGAA SS