Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4126 |
Symbol | |
ID | 5193151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4631169 |
End bp | 4632467 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588603 |
Product | phage integrase family protein |
Protein accession | YP_001269434 |
Protein GI | 148549332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.727989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.817809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA CCCGTGAAGT GAAGCTGAGC GAAGCCGAAG TGCGCCGGCA GGCCGCCGAC AAGTCAGTAC GCGACCTGCG CGACCCTCGT CACCCCGGCC TGTATCTGCG CTTCTGGAGC AACCGCGAGC GTGGCACCTG GCACCTGGTG CGCGGCAAGA AGTGGGTGCC GGTCGCCCGC TGGCCTGACC TGACCGTGGC GGCGGTGATT GCCGAGCTGC CCGCGCTGCG TCAGCGCCTG CTGCGCGATC CGGCCACGGC ACCGGTGGTT TCCGGCATGG CCACCGTGGG GCAGCTGCTT GACTGGTACG GTGACCGCAT GGCGCGCGAC CGCTCGCTGT CGGCGAAGCG CAAGGCCGGC GCCAAGTCCG CCATTGCCCA GCACCTCAAG CCGCGCCTTG CTGACCTGGC CCTGGCTGAC GTGACTGCCG ACGCGCTGGA CAAGCACCTG ATGTGGCCGT GCCAGGCCGA GGTGTCGCTG TCCTACCTGC GGCAGATGTT CGCGCTGCTG CTGACAGCCT TCCGCCAGGC CCTGCAGCTG GGGTTGATCG ACCGAAACCC CATGGCCGGG ATGCGCTTCA ACGACTTCAC CAAGGCCAAG ATCCTGCCCA AGGCGGCGCG CCTGCGCGAT GTGCAACTGC CGGAGCTGAT GCAGCAGCTG GCCCAGGCAT TCGAGCAGGA ACCAGGCGCT GCCATGCTGG CCCTGATGAT GCTGGCCCAC GGCACCCGGA TCGGTGAGAC CCGCATGGCG CGCTGGAATG AGATCTCGCT GGCAGCGGCC GAGTGGTTCA TCCCCGCCGC CAACGCCAAG ACTCGCACGG AGCACCGCCT GCCGCTGACC GCCCAGGTGC AGGCGCTGCT GACTCGGTAC AGGGCCATCC AGCAGGCCGA GGGCTACGAA GGTGTGTACC TGTTCCCGAA TCGCCGGGGC CTGTGCCTGA GCGAGACGCA GGCCAGCAAC GTGTTCAAGC GCATGGGGCA GGGTGAGTGG ACCAGTCACG ACCTGCGCAA GGTGTCCCGC AGCACCTGGA CCGACCTCGG CATCGACGGC CACATCGGCG AGATGCTGCT GAACCACAAG CTGGGCAAGA TCGCCAGCAC CTACATCCAC ACCCAGGCCA TGCAGCAGCG CCGCGCCGCG CTGGAGAAGT GGCATGCCTG GCTTGATCGG ATCGGCTTTG CAGCCATTCA CGGCCTTACC AAGGCCTTAT TTGAAATTTC GCAGAATTCG CCAGAGGCCA CAGCAGCCGT GGCACCGAAC GACCTTACCG CATTTGTAAT TAGCGAGGAT TCGAAATGA
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Protein sequence | MSATREVKLS EAEVRRQAAD KSVRDLRDPR HPGLYLRFWS NRERGTWHLV RGKKWVPVAR WPDLTVAAVI AELPALRQRL LRDPATAPVV SGMATVGQLL DWYGDRMARD RSLSAKRKAG AKSAIAQHLK PRLADLALAD VTADALDKHL MWPCQAEVSL SYLRQMFALL LTAFRQALQL GLIDRNPMAG MRFNDFTKAK ILPKAARLRD VQLPELMQQL AQAFEQEPGA AMLALMMLAH GTRIGETRMA RWNEISLAAA EWFIPAANAK TRTEHRLPLT AQVQALLTRY RAIQQAEGYE GVYLFPNRRG LCLSETQASN VFKRMGQGEW TSHDLRKVSR STWTDLGIDG HIGEMLLNHK LGKIASTYIH TQAMQQRRAA LEKWHAWLDR IGFAAIHGLT KALFEISQNS PEATAAVAPN DLTAFVISED SK
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