Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4113 |
Symbol | |
ID | 5195218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4622416 |
End bp | 4623783 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640588590 |
Product | HK97 family phage portal protein |
Protein accession | YP_001269421 |
Protein GI | 148549319 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTTT TCAAATGGGG CAAGAAGTCC GAAGAGAAGG GCCTGCGACC GGCTGATAAC CGCGGTGGCT GGCTTGGCGT GGTGCGCGAG GCGTTTGCCG GTGCCTGGCA GCAAAATGTC GAGGTAGATC AGGACACTGT CTTGGCGTTC TCTGCGGTAT TTGCCTGCAT CACCCTGATT GCATCCGACA TTGCGAAGCT TCGCCTGAAA CTGGTGAAGC TGACCGATGA TGGCGTTTGG GAGGAGGCGG CAAGCCCTTC ATTCTCGCCG GTCATCAAGC GTCCTAACCA CTATCAGAAC CGCATCCAGT TCTATGAGAC CTGGGTGCTG TCGAAGCTGA CCAGTGGCAA CACCTACGTG CTGAAGATCA GGGACGGCCG AGGCGTGGTG ATCAAGATGT TCGTCCTTGA TCCACGCCGC GTTGTTCCTC TTGTCGCTGA TGACGGGAGT GTCTTCTACC GCCTGATGGC GGACAACCTA TCGACACTGG AAGAAGGGTT GACCGTTCCG GCAAGCGAGA TCATCCATGA CCGGATGAAC TGCCTTTTCC ACCCGCTGGT GGGTATATCT CCCATTTTTG CGTGCGGGCT TGCTGCCATG CAGGGGAATG CAATCCAGAA CAACTCGGCC AGGTTCTTCC AGAACGGATC GAAACCTGGT GGTGTGCTGA CGGCCCCGGG TGCAATTGGC GAGGACACAG CCAAACGTCT CAAGGAACAC TGGGACGCCA ACTTTTCCGG GGACAACGCC GGCAAAGTAG CGGTCCTTGG CGATGGTTTG AAGTACGAGT CCATGGCGCT TTCTGCTGCC GATTCACAGC TGATTGAGCA GTTGCGGTGG TCAGCTGAAA CTGTTTGCTC TGCTTTCCAT GTACCTGGCT ACAAGGTTGG GGTCGGCTCC GCGCCGTCCA ACGCGAATGC CGAGGTATCC AACCAGGCGT ATTACTCGGA TTGCCTTCAG TCGCTGATTG AGGCTGCAGA GTTGTGCCTG GACGAAGGGC TTGAGCTTCC GGTGCCCTAT GGGACTGAGT TCGACCTGGA CGGGTTGCTG CGCATGGACA CCCCCACTTT GTACAAGGCG AACAACGACG CTGTTGGCGG TGGCTGGATG AAGCCCAACG AGGCGCGCAA GCGGGCTGGA CTGGCGCCTG TAGAAGGCGG TGACTCGCCC ATGATCCAGC AGCAGAACTA CAGCCTTGCG GCTATCGCCC GGCGCGATGC TCAAGCCGAC CCGTTCGGAA AGACTCAGCC AACAGCGCCG GCGTTGCCGC CACCTGAGCC CGATGAGCCC TCAGCAGAAG ACCTGGATGA CCAGGCGCGG ATGTTCGCGC TACTGATCGA GAAGGAGTTG AATCTTGAAT CTGCGTGA
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Protein sequence | MRLFKWGKKS EEKGLRPADN RGGWLGVVRE AFAGAWQQNV EVDQDTVLAF SAVFACITLI ASDIAKLRLK LVKLTDDGVW EEAASPSFSP VIKRPNHYQN RIQFYETWVL SKLTSGNTYV LKIRDGRGVV IKMFVLDPRR VVPLVADDGS VFYRLMADNL STLEEGLTVP ASEIIHDRMN CLFHPLVGIS PIFACGLAAM QGNAIQNNSA RFFQNGSKPG GVLTAPGAIG EDTAKRLKEH WDANFSGDNA GKVAVLGDGL KYESMALSAA DSQLIEQLRW SAETVCSAFH VPGYKVGVGS APSNANAEVS NQAYYSDCLQ SLIEAAELCL DEGLELPVPY GTEFDLDGLL RMDTPTLYKA NNDAVGGGWM KPNEARKRAG LAPVEGGDSP MIQQQNYSLA AIARRDAQAD PFGKTQPTAP ALPPPEPDEP SAEDLDDQAR MFALLIEKEL NLESA
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