| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4082 |
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| Symbol | |
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| ID | 5192282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4597044 |
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| End bp | 4597694 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588559 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001269390 |
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| Protein GI | 148549288 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAT ACGAAATCCT GATTGCCGAT GACCACCCAC TGTTCCGTGG CGCCCTGCGC
CAGGCCGTTA CCCTCGGGCT TGGCTCCGAT GTGCGTCTGG TCGAAGTCGC AAGCATTGCC
GAACTGGAAA CCCGCCTGAG CGAAAAAGCC GACTGGGACC TGGTGCTGCT GGACTTGAAC
ATGCCGGGTG CCTACGGTTT TTCCGGTCTG GTGCTGCTCC GCGGGCAGTA CCCGCAGATC
CCCGTGGTGA TGGTTTCGGC ACAGGAAGAG GCCGCCGTGG TGGTCAAGTC CCGCGAGTTC
GGCGCCAGTG GTTTCATTCC CAAGTCCAGC ACCCTGGAAG TGATCCAGGA TGCGGTGCGC
AAGGTGCTTG ATGGTGAGGT CTGGTGGCCG CCGCAGGCGT TCGAAAAGGT CGATGTTTCG
GCCGAGGCCA AGGCCGCCAG CGAAGGCTTG GCCAGCCTCA CGCCGCAGCA GTTCCGCGTA
CTGACCATGG TCTGCGAAGG CTTGCTGAAC AAGCAGATCG CCTATGAGCT GAGCGTGTCG
GAAGCGACCA TCAAGGCCCA CGTGACCGCG ATCTTCCGCA AGCTGGGCGT GCGTACCCGG
ACCCAGGCTG CATTGCTGCT GCAACAACTT GAATCGGTTG CCAGCAACTG A
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| Protein sequence | MATYEILIAD DHPLFRGALR QAVTLGLGSD VRLVEVASIA ELETRLSEKA DWDLVLLDLN
MPGAYGFSGL VLLRGQYPQI PVVMVSAQEE AAVVVKSREF GASGFIPKSS TLEVIQDAVR
KVLDGEVWWP PQAFEKVDVS AEAKAASEGL ASLTPQQFRV LTMVCEGLLN KQIAYELSVS
EATIKAHVTA IFRKLGVRTR TQAALLLQQL ESVASN
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