Gene Pput_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4080 
Symbol 
ID5192537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4595682 
End bp4596608 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID640588557 
ProductLysR family transcriptional regulator 
Protein accessionYP_001269388 
Protein GI148549286 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCA CACTCCGTCA AATGCAAGTC TTCGTCGCCG TCGCCCAGCA CCAAAGCGTC 
TCTCGGGCCG CCAGCCTGTT GGCGCTGTCG CAGTCGGCCG CCAGTACCTC TATCACGGAA
CTGGAGCGGC AATCGAGCTG CCAGCTGTTC GACCGTGCCG GCAAACGCCT GGCCCTCAAT
GCCCTGGGCC ATCAATTGCT GCCACAAGCA GTAGCCCTGC TTGATCAGGC CAAGGAAATC
GAAGACCTGC TCAACGGCAA ATCCGGTTTC GGCTCACTGG CGGTCGGCGC CACCCTCACC
ATCGGCAACT ACCTGGCCAC CCTGCTGATC GGCAACTACA TGCAGACACA CCCGGAAAGC
CAGGTAAAAC TGCATGTTCA AAATACTGCG CATATCGTGC AACAGGTCGC GCACTACGAA
ATTGATCTGG GTCTAATCGA AGGTGACTGC AATCACCCCG ACCTGGAAGT TCAGCCGTGG
GTCGAGGACG AACTGGTGGT GTTCTGTGCG CCACAGCACC CACTGGCGAA ACTGGGCCGC
GCCGATATCG AAAGCCTTTC GCAGGAGGCG TGGATCCTGC GCGAACAAGG CTCAGGCACG
CGCCTGACCT TCGACCAGGC CATGCGCCAT CACCGCGCCA ACCTTAATAT TCGCCTGGAG
CTGGAGCACA CCGAAGCGAT CAAGCGCGCG GTGGAGTCGG GCCTGGGCAT CGGTTGCATT
TCACGTCTGG CCCTGCGCGA CGCCTTCCGC CGTGGCAGCC TGGTACCTGT GGAAACACCA
GAGCTGGACC TGCTGCGCCA GTTCTACTTC ATCTGGCACA AACAGAAGTA CCAGACCTCG
GCCATGCGTG AGTTTCTCGA GCTATGCCGC AGCTTCACTG CGGGCTTTAC CCGCAGTGAC
GAGATCGTGC TGCCGCCGAT CGCTTAA
 
Protein sequence
MRFTLRQMQV FVAVAQHQSV SRAASLLALS QSAASTSITE LERQSSCQLF DRAGKRLALN 
ALGHQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GNYMQTHPES
QVKLHVQNTA HIVQQVAHYE IDLGLIEGDC NHPDLEVQPW VEDELVVFCA PQHPLAKLGR
ADIESLSQEA WILREQGSGT RLTFDQAMRH HRANLNIRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGSLVPVETP ELDLLRQFYF IWHKQKYQTS AMREFLELCR SFTAGFTRSD
EIVLPPIA