Gene Pput_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4054 
SymbolpurN 
ID5194908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4569935 
End bp4570588 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID640588531 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001269362 
Protein GI148549260 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCA AGACCTGCAA TGTAGTGGTA CTGCTGTCGG GCTCCGGCAG CAACCTGCAA 
GCCCTGATCG ACAGCTGCCA AGGGCAGGAC AGCCCGGTGC GTATCCGCGC GGTGGTTTCC
AACCGCGCCG ATGCCTACGG CCTGCAACGC GCCGCAGCGG CCGGCATCGA CAGCGTCGTG
CTCGACCACA CCCAGTTCGA CGGCCGTGAA GCCTTCGATG CCGCCCTGAT GGCGCGCATC
GACGGCTTTG CCCCGGACCT GGTGGTGCTG GCCGGTTTCA TGCGCATCCT CAGTGGCGAC
TTCGTGCGCC ACTATCAGGG CCGCCTGCTC AACATCCACC CGTCGCTGCT GCCCAAGTAC
AAGGGCCTGC ATACGCATCG CCGGGCATTG GAAGCTGGCG ACGCCGAGCA TGGCTGCAGC
GTACACTTCG TGACTGAGGA ACTCGATGGC GGCCCACTGG TCGTACAGGC TGTGGTACCG
GTGGCGTCTG ATGACACCGT CGAAAGCCTG GCACAGCGGG TACACCATCA GGAACACCTG
ATCTACCCAC TGGCGGTGCG CTGGTTCGCT GAAGGGCGCT TGCGTCTCGG CGAACACGGT
GCATTACTGG ACGGCCAGCC ACTGGCAGCC AGCGGTCACT TGATTCGATC CTAG
 
Protein sequence
MPSKTCNVVV LLSGSGSNLQ ALIDSCQGQD SPVRIRAVVS NRADAYGLQR AAAAGIDSVV 
LDHTQFDGRE AFDAALMARI DGFAPDLVVL AGFMRILSGD FVRHYQGRLL NIHPSLLPKY
KGLHTHRRAL EAGDAEHGCS VHFVTEELDG GPLVVQAVVP VASDDTVESL AQRVHHQEHL
IYPLAVRWFA EGRLRLGEHG ALLDGQPLAA SGHLIRS