| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4040 |
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| Symbol | cobT |
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| ID | 5192431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4556088 |
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| End bp | 4557143 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588517 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001269348 |
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| Protein GI | 148549246 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CCTGGTGGCG TGACGCCTGC CAACCCCTCG ACAACGCCGC CATGGACCAG
GCCCGCGCCC GTCAGCAGCA ACTGACCAAA CCTGCAGGCT CGCTCGGCCA ACTTGAAGCG
CTGGCGATTC AGCTGGCTGG CCTTCAGGGG CTTGAACGAC CCACGCTGGA TCAGGTTGCC
ATTACCATTT TTGCCGGCGA CCACGGCGTG GTCGAAGAGG GCATCTCGGC CTATCCGCAG
GCGGTAACCG GGCAGATGCT ATGTAACTTC GTCGGCGGGG GCGCGGCGAT CAGTGTGCTG
GCGCGGCAGC TGCAGGCCAG CCTGGACGTG GTCGACCTGG GCACCATTGA CGCGCAGCTG
GAACTGCCCG GCGTGCGCCA TCTGCGCCTG GGCACCGGTA CTGCCAACTT TGCCCGTCAA
CCCGCGATGA CCGAAAACCA GCTGCAAGCG GCCTTGCAGG CCGGTCGCGA CAGTGCCCAG
CGCGGCGCCG AACAGGGCGC ACAGCTGTTC ATCGGTGGCG AGATGGGCAT TGGTAACACC
ACAGCCGCCG CAGCCTTGGC CAGTGTTCTG CTGGGGTGTC CGGCGTCGGA GCTGAGCGGC
CCTGGCACCG GTCTGGACAA CGCCGGGGTA CAGCACAAGG CTGAAGTCAT CGAGAGGGCG
CTGCGCCTGC ATGGCCTGCG TGCTGAAGAC CCGTTGCAGG TACTGGGCTG TGTTGGCGGT
TTCGAGATCG CGGCGTTGGT CGGTGCCTAC ATAGGTTGTG CGCAGGCGGG TGTCGCGGTG
CTGGTGGATG GCTTTATCTG CAGTGTCGCT GCGCTCGTGG CAGTGCGCCT CAACCCGCAG
TGTCGGGCCT GGCTGTTGTT CGCTCATCAG GGCGCTGAAC CCGGGCACAA GACCTTGCTT
GCTGCACTGC AGGCCGAGCC CCTGCTGGCC TTGGGCTTGC GCCTGGGTGA GGGCAGTGGC
GCTGCCTTGG CGGTGCCGCT GTTGCGCCTG GCCTGTGCGC TGCATGGGCA GATGGCGACC
TTTGCCGAGG CCGCGGTGGC GGACCGCCCG GCATGA
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| Protein sequence | MTQAWWRDAC QPLDNAAMDQ ARARQQQLTK PAGSLGQLEA LAIQLAGLQG LERPTLDQVA
ITIFAGDHGV VEEGISAYPQ AVTGQMLCNF VGGGAAISVL ARQLQASLDV VDLGTIDAQL
ELPGVRHLRL GTGTANFARQ PAMTENQLQA ALQAGRDSAQ RGAEQGAQLF IGGEMGIGNT
TAAAALASVL LGCPASELSG PGTGLDNAGV QHKAEVIERA LRLHGLRAED PLQVLGCVGG
FEIAALVGAY IGCAQAGVAV LVDGFICSVA ALVAVRLNPQ CRAWLLFAHQ GAEPGHKTLL
AALQAEPLLA LGLRLGEGSG AALAVPLLRL ACALHGQMAT FAEAAVADRP A
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