Gene Pput_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4039 
Symbol 
ID5192430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4555525 
End bp4556091 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID640588516 
Productphosphoglycerate mutase 
Protein accessionYP_001269347 
Protein GI148549245 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID[TIGR03162] alpha-ribazole phosphatase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCG ACTTGCTGCG CCATGGTGAA ACGGAACAAG GCGGCCTGCG TGGCAGCCTT 
GATGATGCCT TGACCGACAA GGGCTGGGCA CAGATGCGCC GCGCGGTGGC CGACGGCGGC
CCATGGCAGG TGCTGGTCAG CTCGCCGCTG CAACGTTGTG GGCGTTTTGC CGATGAGCTG
GGTGCGCAGT TGAACCTGCC TGTGCAGCGT GAGCCCGCCC TGCAGGAACT GCACTTCGGT
GATTGGGAGG GCCAAAGTGC CGCGCAGATC ATGGAGCACC AGGCTGATGC ACTGGGCCGT
TTCTGGGCCG ACCCTTACGC CTTCACACCG CCCAATGGCG AGCCGGTCGA GGCGTTTGCC
GAACGGGTGC TGGCGGCTGT CGAGCGTTTG CGCCTTCAAC ATGCCGGCAA GCGCGTGCTG
CTGGTCACCC ATGGCGGCGT CATGCGGCTG TTACTGGCCT GTGCCCGTGG CTTGCCCAGG
GAGCAGTTGC TGCAGGTCGA GGTGGGCCAT GGCGCGTTGA TGCGGCTGGT GCCAGGTGGC
GATGGGCAAC TGGTCGAGGC GCCTTGA
 
Protein sequence
MILDLLRHGE TEQGGLRGSL DDALTDKGWA QMRRAVADGG PWQVLVSSPL QRCGRFADEL 
GAQLNLPVQR EPALQELHFG DWEGQSAAQI MEHQADALGR FWADPYAFTP PNGEPVEAFA
ERVLAAVERL RLQHAGKRVL LVTHGGVMRL LLACARGLPR EQLLQVEVGH GALMRLVPGG
DGQLVEAP