Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4020 |
Symbol | |
ID | 5195291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4533866 |
End bp | 4535743 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588497 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_001269328 |
Protein GI | 148549226 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT CTTCGCAATT CACCTTGCTC GGCAAGCGGC GTTTCCTGCC GTTTTTCATC ACTCAGTCGC TGGGTGCCTT CAACGACAAC CTGTTCAAGC AGTCGCTGAT CCTGGCGATT TTGTTCAAGC TCAGCCTGGG CGATGGTGAC CGATCGATCT GGGTCAACTT GTGTGCCTTG CTGTTCATCC TGCCGTTTTT CCTGTTTTCG GCGCTGGGCG GGCAGTTTGG CGAGAAGTTC GCCAAGGATG CGCTGATCCG TGCAATCAAA CTGGCCGAAA TCGTGATCAT GGCGATGGGT GCGCTGGGCT TTGTCACCAA CCATCTGTGG CTGATGCTGG TGGCCCTGTT CGGTATGGGG ACCCACTCGG CGCTGTTCGG CCCGGTGAAG TATTCGATCC TGCCGCAGGC CCTGCGCGAG GAAGAGTTGG TGGGCGGTAA CGGGCTGGTG GAAACCGGCA CCTTCCTCGC CATCCTCGCC GGCACCATCG GCGCGGGGGT GATGATGTCG GCCGACAGCT ACGCAACAGT GGTGGCCGGT GGCGTGGTCG GCACGGCGGT ACTCGGCTAC CTCGCCAGCC GCTGGATCCC GCGGGCGGCT GCCGCCTCGC CGCAAATGCC GCTGGACTGG AACATCTTCA AGCAGTCGTG GGTGATCTTG CGCATGGGCC TGGGCCAGCC GCCGGCGGTG TCGCGCTCGA TCGTCGGCAA CTCGTGGTTC TGGTTTGTTG GCGCTATCTA CCTCACGCAG ATCCCGGCCT ATGCCAAGGA TTGGCTGCAC GGTGACGGCA CCGTGGTGAC CCTGGTGCTG ACCCTGTTCT CGGTGGGCAT TGCCCTGGGC TCGCTGCTGT GTGAGCGGCT CAGTGGACGC AAGGTGGAAA TCGGCCTGGT GCCGTTCGGT TCGTTCGGCC TGACCCTGTT CGGCCTGCTG TGGTGGTGGC ACTCTGGTGA TGTACCGGCT GCAGCAGCGC CGCACGACTG GCTGGCACTG CTGGGCATGA GCCAGGCCTG GTGGATCTTG CTGTCGATCA TTGGCCTGGG TGTGTTCGGC GGCTTCTACA TCGTGCCGCT GTATGCGTTG ATCCAGGCCC GCACGGCCGA GGACGAGCGC GCCAGGGTAA TCGCGGCCAA CAACATCCTC AATGCCTTGT TCATGGTGGT GTCGGCGGTG CTCACCATCA TCCTGCTAGG CGTGGCCAAG CTGAGCATCC CGCAGCTTTT CCTGGTGGTG TCGCTGCTCA ATATCGCGGT CAACACCTAT ATCTTCAGGA TCGTGCCCGA GTTCACCATG CGCTTCCTGA TCTGGCTGCT CAGCCATTCG ATGTACCGCG TGCAGCACCG AGACCTCGAG CGCATCCCCG ACGAAGGTGC AGCGTTGCTG GTGTGCAACC ACGTGTCGTT CGTCGATGCG TTGCTGCTGG GCGGGGCCAT ACGCCGGCCG ATCCGCTTTG TCATGTACTA CAAGATCTAC AACCTGCCGG TGCTCAACTT CGTGTTTCGC ACTGCCGGTG CCATCCCGAT TGCCGGGCGT AACGAAGACC AGGCGACGTA CGAGCGGGCC TTCGCGCGGA TTGCCGAGTA CCTGGCTGAT GGCGAGCTGG TGTGCATCTT CCCGGAAGGC AAGCTGACGG GCGATGGCGA AATCGATGTC TTCAAGGGTG GGGTCAGCCG CATCCTCGAA GAAACGCCGG TACCGGTGAT TCCGCTGGCC TTGCAGGGGT TGTGGGGTAG CTTCTTCAGC CGCGACCCGG CCAAGGGCTT CTTCAAGCGC CTGTGGTCGC GGGTGACCAT CGTGGCAGGC GCCGCCGTCC CGGTGGAGGC GGCGCAGCCT GAAGTGTTGC GCGAACAGGT CAGCCGCCTG CGCGGCCCTC TGCGATAG
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Protein sequence | MSHSSQFTLL GKRRFLPFFI TQSLGAFNDN LFKQSLILAI LFKLSLGDGD RSIWVNLCAL LFILPFFLFS ALGGQFGEKF AKDALIRAIK LAEIVIMAMG ALGFVTNHLW LMLVALFGMG THSALFGPVK YSILPQALRE EELVGGNGLV ETGTFLAILA GTIGAGVMMS ADSYATVVAG GVVGTAVLGY LASRWIPRAA AASPQMPLDW NIFKQSWVIL RMGLGQPPAV SRSIVGNSWF WFVGAIYLTQ IPAYAKDWLH GDGTVVTLVL TLFSVGIALG SLLCERLSGR KVEIGLVPFG SFGLTLFGLL WWWHSGDVPA AAAPHDWLAL LGMSQAWWIL LSIIGLGVFG GFYIVPLYAL IQARTAEDER ARVIAANNIL NALFMVVSAV LTIILLGVAK LSIPQLFLVV SLLNIAVNTY IFRIVPEFTM RFLIWLLSHS MYRVQHRDLE RIPDEGAALL VCNHVSFVDA LLLGGAIRRP IRFVMYYKIY NLPVLNFVFR TAGAIPIAGR NEDQATYERA FARIAEYLAD GELVCIFPEG KLTGDGEIDV FKGGVSRILE ETPVPVIPLA LQGLWGSFFS RDPAKGFFKR LWSRVTIVAG AAVPVEAAQP EVLREQVSRL RGPLR
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