Gene Pput_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4020 
Symbol 
ID5195291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4533866 
End bp4535743 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content63% 
IMG OID640588497 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001269328 
Protein GI148549226 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACT CTTCGCAATT CACCTTGCTC GGCAAGCGGC GTTTCCTGCC GTTTTTCATC 
ACTCAGTCGC TGGGTGCCTT CAACGACAAC CTGTTCAAGC AGTCGCTGAT CCTGGCGATT
TTGTTCAAGC TCAGCCTGGG CGATGGTGAC CGATCGATCT GGGTCAACTT GTGTGCCTTG
CTGTTCATCC TGCCGTTTTT CCTGTTTTCG GCGCTGGGCG GGCAGTTTGG CGAGAAGTTC
GCCAAGGATG CGCTGATCCG TGCAATCAAA CTGGCCGAAA TCGTGATCAT GGCGATGGGT
GCGCTGGGCT TTGTCACCAA CCATCTGTGG CTGATGCTGG TGGCCCTGTT CGGTATGGGG
ACCCACTCGG CGCTGTTCGG CCCGGTGAAG TATTCGATCC TGCCGCAGGC CCTGCGCGAG
GAAGAGTTGG TGGGCGGTAA CGGGCTGGTG GAAACCGGCA CCTTCCTCGC CATCCTCGCC
GGCACCATCG GCGCGGGGGT GATGATGTCG GCCGACAGCT ACGCAACAGT GGTGGCCGGT
GGCGTGGTCG GCACGGCGGT ACTCGGCTAC CTCGCCAGCC GCTGGATCCC GCGGGCGGCT
GCCGCCTCGC CGCAAATGCC GCTGGACTGG AACATCTTCA AGCAGTCGTG GGTGATCTTG
CGCATGGGCC TGGGCCAGCC GCCGGCGGTG TCGCGCTCGA TCGTCGGCAA CTCGTGGTTC
TGGTTTGTTG GCGCTATCTA CCTCACGCAG ATCCCGGCCT ATGCCAAGGA TTGGCTGCAC
GGTGACGGCA CCGTGGTGAC CCTGGTGCTG ACCCTGTTCT CGGTGGGCAT TGCCCTGGGC
TCGCTGCTGT GTGAGCGGCT CAGTGGACGC AAGGTGGAAA TCGGCCTGGT GCCGTTCGGT
TCGTTCGGCC TGACCCTGTT CGGCCTGCTG TGGTGGTGGC ACTCTGGTGA TGTACCGGCT
GCAGCAGCGC CGCACGACTG GCTGGCACTG CTGGGCATGA GCCAGGCCTG GTGGATCTTG
CTGTCGATCA TTGGCCTGGG TGTGTTCGGC GGCTTCTACA TCGTGCCGCT GTATGCGTTG
ATCCAGGCCC GCACGGCCGA GGACGAGCGC GCCAGGGTAA TCGCGGCCAA CAACATCCTC
AATGCCTTGT TCATGGTGGT GTCGGCGGTG CTCACCATCA TCCTGCTAGG CGTGGCCAAG
CTGAGCATCC CGCAGCTTTT CCTGGTGGTG TCGCTGCTCA ATATCGCGGT CAACACCTAT
ATCTTCAGGA TCGTGCCCGA GTTCACCATG CGCTTCCTGA TCTGGCTGCT CAGCCATTCG
ATGTACCGCG TGCAGCACCG AGACCTCGAG CGCATCCCCG ACGAAGGTGC AGCGTTGCTG
GTGTGCAACC ACGTGTCGTT CGTCGATGCG TTGCTGCTGG GCGGGGCCAT ACGCCGGCCG
ATCCGCTTTG TCATGTACTA CAAGATCTAC AACCTGCCGG TGCTCAACTT CGTGTTTCGC
ACTGCCGGTG CCATCCCGAT TGCCGGGCGT AACGAAGACC AGGCGACGTA CGAGCGGGCC
TTCGCGCGGA TTGCCGAGTA CCTGGCTGAT GGCGAGCTGG TGTGCATCTT CCCGGAAGGC
AAGCTGACGG GCGATGGCGA AATCGATGTC TTCAAGGGTG GGGTCAGCCG CATCCTCGAA
GAAACGCCGG TACCGGTGAT TCCGCTGGCC TTGCAGGGGT TGTGGGGTAG CTTCTTCAGC
CGCGACCCGG CCAAGGGCTT CTTCAAGCGC CTGTGGTCGC GGGTGACCAT CGTGGCAGGC
GCCGCCGTCC CGGTGGAGGC GGCGCAGCCT GAAGTGTTGC GCGAACAGGT CAGCCGCCTG
CGCGGCCCTC TGCGATAG
 
Protein sequence
MSHSSQFTLL GKRRFLPFFI TQSLGAFNDN LFKQSLILAI LFKLSLGDGD RSIWVNLCAL 
LFILPFFLFS ALGGQFGEKF AKDALIRAIK LAEIVIMAMG ALGFVTNHLW LMLVALFGMG
THSALFGPVK YSILPQALRE EELVGGNGLV ETGTFLAILA GTIGAGVMMS ADSYATVVAG
GVVGTAVLGY LASRWIPRAA AASPQMPLDW NIFKQSWVIL RMGLGQPPAV SRSIVGNSWF
WFVGAIYLTQ IPAYAKDWLH GDGTVVTLVL TLFSVGIALG SLLCERLSGR KVEIGLVPFG
SFGLTLFGLL WWWHSGDVPA AAAPHDWLAL LGMSQAWWIL LSIIGLGVFG GFYIVPLYAL
IQARTAEDER ARVIAANNIL NALFMVVSAV LTIILLGVAK LSIPQLFLVV SLLNIAVNTY
IFRIVPEFTM RFLIWLLSHS MYRVQHRDLE RIPDEGAALL VCNHVSFVDA LLLGGAIRRP
IRFVMYYKIY NLPVLNFVFR TAGAIPIAGR NEDQATYERA FARIAEYLAD GELVCIFPEG
KLTGDGEIDV FKGGVSRILE ETPVPVIPLA LQGLWGSFFS RDPAKGFFKR LWSRVTIVAG
AAVPVEAAQP EVLREQVSRL RGPLR