Gene Pput_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4016 
Symbol 
ID5193539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4526256 
End bp4530281 
Gene Length4026 bp 
Protein Length1341 aa 
Translation table11 
GC content65% 
IMG OID640588489 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001269324 
Protein GI148549222 
COG category[R] General function prediction only
[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACA GCGAAGTACG CAGCGTCTGC CCCTACTGCG GCGTGGGCTG CGGCATCGTC 
ATGAGCGTTG CCGATGGCAA GGTCGGCAAG ATCAGCGGCG ACAAGCTGCA CCCGAGCAAC
TTTGGCCGCC TATGCACCAA AGGCCTCACC GCACACCTGC CACTGAGTGC CAGCGGGCGC
ATGGCCGACG CCTATGTGCG CCAGCAACGC AGCCAGCCGC CAGTGCGCAC CAGCATGGAC
CAGGCCATCG CTGCCACCGC CGAGCGTCTG CGCAGCATCA TCGACCAGCA CGGCCCGGAT
GCCGTGGCGC TCTACGTGTC CGGGCAAATG TCGCTGGAGG CCCAGTACCT GGCCAACAAG
TTGGCCAAGG GCTTTATCCG TACGCGCCAC ATCGAGTCCA ACTCGCGCCT GTGCATGGCC
AGCGCCAGCA GTGGCTACAA GCTGTCGCTT GGCGCCGATG GCCCACCTGG CAGTTACCAG
GACTTCGAGC ACGCCGACGT ATTTTTGGTG ATCGGCGCCA ACATGGCCGA CTGCCACCCG
ATCCTGTTCC TGCGCCTGCT TGATCGGGTC AAGGCCGGTG CGAAGCTGAT CGTCGTCGAC
CCACGTCGCA GCGCCACCGC CGACAAGGCC GACCTGTTTC TGCAGGTGCG CCCCGGCAGC
GACATGGCCT TGCTCAACGG CCTTTTGCAC CTGCTGCATC GCAATGGCCG CACCCACCCC
GACTTCATCG CCCGCCACAC CGAAGGCTGG GACGAACTGC CGGCCTTCCT CGACGACTAC
CCCCCCGAGC GCGTCGCCGC CATCACCGGG CTGGCCGAGG CCGATATCAT CAAGGCCGCC
GAATGGATCG GCAGCGCCAA CAACTGGATG AGCTGCTGGA CCATGGGCTT GAACCAGAGC
ATTCACGGTA CCTGGCACAG CAACGCCATC TGTAACCTGC ATTTGGCCAC GGGTGCCATC
TGCCGCCCCG GTAGCGGCCC GTTCTCGCTG ACCGGCCAGC CCAATGCCAT GGGCGGCCGC
GACATGGGCT ACATGGGCCC CGGCTTGCCA GGCCAGCGCT CAGCGTTGGC GGACGACGAC
CGCGCGTTCG TCGAGCGACA GTGGCAACTG CCACCCGGCA GCCTGCGCAG CGAGGGTGGC
GAGGGTACGG TGGCGCTGTT CGGGCAGATG AAAACCGGTG AAGTGAAAGC CTGCTGGGTC
ATCTGCAGCA ACCCGGTAGC CAGTGTCGCC AACCGCCAGC AAGTGATCGA CGGCCTGCGC
AAGGCCGAAC TGGTCATTAC CCAGGACGCC TTCCTCGACA CCGAAACCAA CCGCTACGCC
GACATCCTCC TGCCGGCCGC GCTGTGGGCC GAAGGTGAGG GTGTGATGAT CAACAGCGAG
CGCAACCTGA CCCTGATGCC ACGCGCTGTC GAGCCCCCCG GGCAAAGCTT GCCGGACTGG
CAGATCATTG CCCGCGTGGC GTGTGCCATG GGCTATGCCG ACGCCTTCGA CTACCCCAAT
GCCGAAGCGG TGTATGAGGA AATACGCCGC TTCCACAACC CTGTTACCGG TTATGACCTG
CGCGGTATCG GCTATGCCGA ATTGCGGACA CAGCCGCGCC AGTGGCCTTG TGCACCGGGC
AGCGAGCAGC ATCGTAGCCC GCTGCGCTAC CTCAACGACG GCAGCAGCCA GGCGCTCCTG
CTCGATGCCC GGGGTAGGCG GCCGGCACTG GCCTTTCCCA CCGCCAGCGG CAAGGCGCGC
TTCTTTGCGC GGCCCTGGTT GCCGGCAGCG GAAGTGCCGG ACGATGACTA CCCCATGGTG
CTTAACACTG GCCGTGTGCA GCACCAATGG CACACGTTGA CCAAGACCGG CAAGGTGCCG
GCACTGAACA AGCTGGAGCC CGGCCCCTAC CTTGAGATTC ACCCCGAGGA TGCCGCCCGG
CTGGGTGTCG CTGAAAAGGA CCAGGTGGCC GTTCGCTCAC GCCGGGGGCA CGCCGTGTTG
CCGGCGCGCA TCAGTGACCG GGTCATGCCG GGCAACTGCT TTGCGCCGTT TCACTGGAAT
GACCTGATCG GCGAGCAATT GGCGATCAAT GCCGCGACCT GCGATGCGGT CGACCCGCTG
TCGCTGCAGC CTGCCTTCAA ACACTGCGCC ATAGCCCTGG AGCGGGTCGC AGGCGAGCGC
ATCGACGCCC TTGATCTGAA CACTGCCACT GTAGAGCCTG TCCGCATGCC GACCGCCACC
CTGTCCCGTC TGCTTGGCCT GCACACCCTG CCGGTTCCGG TGCTGGCCGA AGAAGAGCGT
CATTACCTGC AAGGTTTCCT GCTGGGCCTG GACCAGGCCC GCGCCGAGGG CGTACCCCGC
CTGCCGCCCA GTGCGCCGCT GGCTGCCAGC CGTCGTTTGT TTGTCGACGG TTTGCTGGCC
GGGCTGTTCG CCCAGCCTGC AACTGCGCCC ATCGCGGCAC AGGCCGCGCC ATGGCATCAG
GTGCTGTGGG CCTCGCAGAC CGGCAATGGT GAGCAACTGG CCGAACGCTG TGCCGCGCGC
CTGCGCGATG CTGGTCTGAA CGTGCAACTC AGCTGCCTGG AGGCGGTCAG CCCAAGCCAG
CTGCAGGGTG TTGCCAGTGT GGTGTTGATC GCCAGCACCT TTGGCGATGG CGACGCGCCC
GACAGCGGCG CGGCATTCTG GCAGGCCTTG CAGGGCGAGG AGGGCGCCCA CTGCGCCGGG
CTGCCCTATG CCGTACTGGC CTTGGGCGAC TCCAGTTACG ACCAGTTCTG CGGTTTTGGC
CGCAAGCTCG ACCAGCGCCT GGCCGAGCTG GGAGGGCAGC GCCTGCTGCA ACGGGTGGAC
TGCGAGCCAG ACTTCGACGA AGCCTTTGCC AGTTGGCTCG AAGCGTTATT ACCTGCACTG
GGCACTGCCG CGGCGCCACC TCCGGCGAGT GAAGCTGCAC CCGTATCGGC CTTCAGCAAG
CAGCAACCCT GGATGGCCAC CGTGCTGGAA AACCGCCTGC TCAATGGCCC CGGCGCCAGC
AAGGAAACCC GCCAGCTGGT CTTCGACCTG GGCGGCAGCG GCTTCAGTTA TGCTGCCGGC
GATGCCTTGG GCGTATGGCC GCGCAACTGC CCGGCCCTGG TAGAAGAGCT GCTGACACTG
ATGCAGCTCG ATGGCCAGGC GATGGTCGAG CTTAAAGGTC ATTGCGCCAT GCCATTGGCC
GAAGCCCTGC AAGCACATCT GGAAATTGCC AAGGTCACTG CACAACAACT GCAGGCATTT
GCCAGCAATG CGCCTGACCT GCAGCGGTTG CTGCAGCCTG AATGCAAGGC CGAGCTGCAA
GATTGGCTGT GGGGCCGGCA GCTGGTCGAT GTGCTGCGCG CTTTCCCCCA GCAGTTGCCG
CTGGCCAGCT GGCTGGAACT GCTCAAGCCA TTGCAGCCGC GGCTCTATTC GATCAGTTCC
AGCCCGCTGG CGCACCCAGG CCAGGTGCAT CTGACGGTAT CGACGGTGCG TTATGGCGAA
CGTAAAGGCG TGTGCTCAAG CTTCCTTGCC GACCGTGCGC AGGTGCAGAA AGTGGCGATC
TTCCCGCAGG TGTCGAAGCA CTTCCGCTTG CCCGAGGACG ACAGCGTGCC GGTGATCATG
GTGGGCCCTG GTACTGGCAT TGCACCGTTC CGTGCGTTCC TCGAGGAGCG AGAGGCACGG
GGGGCAAAAG GTGACAACTG GCTGTTCTTC GGTGAGCAGT ACGCAGCGAC CGATTTCTAT
TACCAGGAGC AGTTGCAGGC CTGGGAGGCG GCGGGGCACC TGCGGCTGAA CACGGCGTTC
TCGCGGGACC AGGTCGAGAA GATCTATGTG CAGCAGCGCA TGCTTGAGCA GGGTGCGCTG
TTGTGGCAGT GGCTGGAGGC GGGGGCGTAT TTCTATGTGT GTGGCGATGC GCAGCGTATG
GCCAGGGATG TGGATGCGGC GTTGCGGGTA ATCGTCGCCG AGCATGGCCG GATGGATGCG
GCGGCGGCGG CGGCTTATGT CGAAGGCTTG AGCAAGGCCA GGCGTTATCG GCGCGATGTG
TACTGA
 
Protein sequence
MANSEVRSVC PYCGVGCGIV MSVADGKVGK ISGDKLHPSN FGRLCTKGLT AHLPLSASGR 
MADAYVRQQR SQPPVRTSMD QAIAATAERL RSIIDQHGPD AVALYVSGQM SLEAQYLANK
LAKGFIRTRH IESNSRLCMA SASSGYKLSL GADGPPGSYQ DFEHADVFLV IGANMADCHP
ILFLRLLDRV KAGAKLIVVD PRRSATADKA DLFLQVRPGS DMALLNGLLH LLHRNGRTHP
DFIARHTEGW DELPAFLDDY PPERVAAITG LAEADIIKAA EWIGSANNWM SCWTMGLNQS
IHGTWHSNAI CNLHLATGAI CRPGSGPFSL TGQPNAMGGR DMGYMGPGLP GQRSALADDD
RAFVERQWQL PPGSLRSEGG EGTVALFGQM KTGEVKACWV ICSNPVASVA NRQQVIDGLR
KAELVITQDA FLDTETNRYA DILLPAALWA EGEGVMINSE RNLTLMPRAV EPPGQSLPDW
QIIARVACAM GYADAFDYPN AEAVYEEIRR FHNPVTGYDL RGIGYAELRT QPRQWPCAPG
SEQHRSPLRY LNDGSSQALL LDARGRRPAL AFPTASGKAR FFARPWLPAA EVPDDDYPMV
LNTGRVQHQW HTLTKTGKVP ALNKLEPGPY LEIHPEDAAR LGVAEKDQVA VRSRRGHAVL
PARISDRVMP GNCFAPFHWN DLIGEQLAIN AATCDAVDPL SLQPAFKHCA IALERVAGER
IDALDLNTAT VEPVRMPTAT LSRLLGLHTL PVPVLAEEER HYLQGFLLGL DQARAEGVPR
LPPSAPLAAS RRLFVDGLLA GLFAQPATAP IAAQAAPWHQ VLWASQTGNG EQLAERCAAR
LRDAGLNVQL SCLEAVSPSQ LQGVASVVLI ASTFGDGDAP DSGAAFWQAL QGEEGAHCAG
LPYAVLALGD SSYDQFCGFG RKLDQRLAEL GGQRLLQRVD CEPDFDEAFA SWLEALLPAL
GTAAAPPPAS EAAPVSAFSK QQPWMATVLE NRLLNGPGAS KETRQLVFDL GGSGFSYAAG
DALGVWPRNC PALVEELLTL MQLDGQAMVE LKGHCAMPLA EALQAHLEIA KVTAQQLQAF
ASNAPDLQRL LQPECKAELQ DWLWGRQLVD VLRAFPQQLP LASWLELLKP LQPRLYSISS
SPLAHPGQVH LTVSTVRYGE RKGVCSSFLA DRAQVQKVAI FPQVSKHFRL PEDDSVPVIM
VGPGTGIAPF RAFLEEREAR GAKGDNWLFF GEQYAATDFY YQEQLQAWEA AGHLRLNTAF
SRDQVEKIYV QQRMLEQGAL LWQWLEAGAY FYVCGDAQRM ARDVDAALRV IVAEHGRMDA
AAAAAYVEGL SKARRYRRDV Y