Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3976 |
Symbol | actP |
ID | 5190557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4484380 |
End bp | 4486044 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588449 |
Product | acetate permease |
Protein accession | YP_001269284 |
Protein GI | 148549182 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.900001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.864966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCC AAACCAAAGC CCTGGCCGTA TTGGCCTGCG GAGCCTTCGC ACCCGCCGTG TGGGCCGCCG ATGCCCTGAC CGGCGAGGTG CAGAAACAAC CGCTGAACGT TTCCGCCATC GCCATGTTCG TGGCCTTCGT CGCCTTCACC CTCGGCATCA CCTACTGGGC CTCCAAACGC AACAAGTCGG CATCGGACTA CTACGCTGCC GGCGGCAAGA TCACCGGCTT CCAGAACGGC CTGGCGATTG CTGGCGACTA CATGTCGGCC GCCTCGTTCC TGGGTATTTC CGCGCTGGTG TTCACCTCGG GTTATGACGG CCTGATCTAC TCGATCGGCT TCCTGGTTGG CTGGCCGATC ATTCTTTTCC TGATTGCCGA ACGCCTGCGC AACCTGGGCA AGTACACCTT CGCCGACGTG GCCTCGTACC GCCTCGGGCA AAAGGAAATT CGCACCCTGT CGGCCTCCGG TTCGCTGGTG GTGGTGGCGT TCTACCTGAT CGCGCAAATG GTCGGCGCCG GCAAGCTGAT CGAGCTGCTG TTCGGTCTGG ACTACCATGT GGCGGTGATC CTGGTGGGTA TCCTGATGTG CCTGTACGTG CTGTTCGGCG GCATGCTGGC CACCACCTGG GTACAGATCA TCAAGGCTGT GCTGCTGCTG TCCGGTGCCA GTTTCATGGC GCTGATGGTC ATGAAGCACG TGGGCTTTGA CTTCAACACG CTGTTCTCCG AAGCGATCAA GGTACACGCC AAGGGCGAGG CGATCATGAG CCCCGGCGGC CTGGTCAAGG ACCCGATCTC GGCATTCTCC CTGGGCCTGG CACTGATGTT CGGTACTGCC GGCCTGCCGC ACATCCTGAT GCGCTTCTTC ACCGTCAGTG ACGCCAAGGA AGCGCGCAAG AGCGTGCTGT ATGCCACCGG CTTCATCGGC TACTTCTACA TCCTCACCTT CATCATTGGC TTTGGCGCAA TCCTGCTGGT TAGCACCAAC CCGGAATTCA AGGACGCCGC AGGCGCTCTG CTGGGTGGCA ACAACATGGC TGCGGTGCAC CTGGCCAATG CGGTGGGTGG CAGTGTGTTC CTCGGCTTCA TCTCGGCGGT GGCCTTTGCC ACCATCCTGG CGGTGGTGGC TGGCCTGACC CTGGCCGGTG CCTCGGCGGT GTCCCACGAC CTGTACGCCA GCGTCTGGCG CAAGGGCAAA GCCAACGACA AGGACGAGAT CCGCGTATCG AAGATCACCA CTGTTGCCCT GGGTGTGCTG GCGATCGGCC TGGGGATTCT GTTCGAGAAG CAGAACATCG CCTTCATGGT CGGCCTGGCG TTCTCCATTG CGGCCAGCTG CAACTTCCCG GTACTGCTGC TTTCGATGTA CTGGAAGAAG CTGACCACCC GCGGCGCCAT GATCGGCGGC TGGCTGGGCC TGGTGAGTGC GGTGACGCTG ATGATCCTTG GCCCGACCAT CTGGGTACAG ATTCTCGGCC ACGAGAAGGC CATCTACCCG TACGAGTACC CGGCGCTGTT CTCGATGGCC ATTGCCTTCG TCAGCATCTG GTTCTTCTCG GTCACCGACA AGTCCAAGGC GGCTGAGGAT GAGCGCGCGC TGTTCTTCCC GCAGTTCGTG CGTTCGCAGA CTGGCCTGGG TGCCAGCGGG GCGGTCTCGC ACTAA
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Protein sequence | MIRQTKALAV LACGAFAPAV WAADALTGEV QKQPLNVSAI AMFVAFVAFT LGITYWASKR NKSASDYYAA GGKITGFQNG LAIAGDYMSA ASFLGISALV FTSGYDGLIY SIGFLVGWPI ILFLIAERLR NLGKYTFADV ASYRLGQKEI RTLSASGSLV VVAFYLIAQM VGAGKLIELL FGLDYHVAVI LVGILMCLYV LFGGMLATTW VQIIKAVLLL SGASFMALMV MKHVGFDFNT LFSEAIKVHA KGEAIMSPGG LVKDPISAFS LGLALMFGTA GLPHILMRFF TVSDAKEARK SVLYATGFIG YFYILTFIIG FGAILLVSTN PEFKDAAGAL LGGNNMAAVH LANAVGGSVF LGFISAVAFA TILAVVAGLT LAGASAVSHD LYASVWRKGK ANDKDEIRVS KITTVALGVL AIGLGILFEK QNIAFMVGLA FSIAASCNFP VLLLSMYWKK LTTRGAMIGG WLGLVSAVTL MILGPTIWVQ ILGHEKAIYP YEYPALFSMA IAFVSIWFFS VTDKSKAAED ERALFFPQFV RSQTGLGASG AVSH
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