| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3969 |
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| Symbol | |
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| ID | 5194236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4477393 |
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| End bp | 4478202 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588442 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001269277 |
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| Protein GI | 148549175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.246181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC GCATCATGAT CACCGGCGCC GGGTCCGGCC TCGGTCGCGA GATCGCCCTG
CGCTGGGCGC GTGAGGGCTG GCGCCTGGCA TTGGCCGATG TCAACGAAAC CGGCCTGCGC
GAAACGCTGG AGCAGGCTCG CCAGGCCGGT GGCGACGGCT TCGTCCAGCG CTGCGACGTG
CGCGACTACA GCCAGCTGAC GGCCCTTGCC CAGGCCTGCG AAGAGAAGTT CGGTGGCGTC
GATGTGATCG TCAACAACGC AGGCGTCGCT TCGGGCGGCT TCTTTGCCGA ACTGTCACTG
GAAGACTGGG ACTGGCAGAT CGCGGTCAAC CTGATGGGCG TGGTCAAGGG CTGCAAGGCC
TTCCTGCCGC TGCTGGAGCG CAGCAAGGGG CGCATTATCA ACGTCGCCTC GATGGCCGCA
CTGATGCAGG GCCCGGGCAT GAGCAACTAC AACGTGGCCA AGGCCGGTGT GCTGGCCTTG
TCTGAAAGCC TGCTGGTGGA GTTGCGTCAG GTAGAGGTGG CAGTGCACGT GGTGTGCCCG
TCGTTCTTCC AGACCAACCT GCTGGACTCG TTCCGCGGGC CGAACCCGGC GATGAAGGCG
CAGGTGGGCA AGCTGCTCGA AGGTTCGCCG ATCAGTGCGG CGGACATTGC CGACTATATC
CATCAGCAGG TCGCTGCAGG CGAGTTCCTC ATCCTGCCTC ATGAGGCAGG ACGCCAGGCC
TGGCAACTGA AACGCCAGGC CCCTGAGCGG CTGTATGACG AGATGGCCGA AATGGCGGTG
AAAATGCGAG CAAAAGCCCC GTCGCGATGA
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| Protein sequence | MQKRIMITGA GSGLGREIAL RWAREGWRLA LADVNETGLR ETLEQARQAG GDGFVQRCDV
RDYSQLTALA QACEEKFGGV DVIVNNAGVA SGGFFAELSL EDWDWQIAVN LMGVVKGCKA
FLPLLERSKG RIINVASMAA LMQGPGMSNY NVAKAGVLAL SESLLVELRQ VEVAVHVVCP
SFFQTNLLDS FRGPNPAMKA QVGKLLEGSP ISAADIADYI HQQVAAGEFL ILPHEAGRQA
WQLKRQAPER LYDEMAEMAV KMRAKAPSR
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