Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3958 |
Symbol | |
ID | 5190412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4463535 |
End bp | 4464059 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588431 |
Product | hypothetical protein |
Protein accession | YP_001269266 |
Protein GI | 148549164 |
COG category | [S] Function unknown |
COG ID | [COG3184] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.309289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0283317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC TCCGTGTCCT TTGTGCCGCC GTTGCCCTGG TTTGCGCCAG CGGCCAGGTA CTCGCTGCCA CCGCCAGCCA CAACGCTGCT GCCGAGAAAT TCCTGACCCT GGCCAACGCC GACAAGCTGG GCACCCCGGT GTACATGCAA GTGCAGCAGA TGTTCGCCCA GCGTTTCGCC CAGACCAAGG CCCCGGCCGC CAAGCAGCCG GTGCTGGAAA GCTACCAGGC CAAGGCCAAT GCCGCGCTGG ACAACGCCAT CGGCTGGAAC AAGCTGAAGC CGAAGATGGT CGACCTGTAC ACCCGGACCT TTACCGAGCA GGAGCTGAAG GACCTGGTCA AGTTCTACGA ATCGCCGCTG GGCAAGAAAG TGCTACGTGA AATGCCCAAG GTCACCCAGC AGTCGGCACA GCTGACCCAG CAGAGCCTGG AGCCCGCAGT ACCGGTGGTG AACAAGCTGC TGGAAGACAT GACCAAAGAG CTGGACCCGA ACGCAGGCAA GGCCGCCGCC CCAGCGAAGA AGTGA
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Protein sequence | MTRLRVLCAA VALVCASGQV LAATASHNAA AEKFLTLANA DKLGTPVYMQ VQQMFAQRFA QTKAPAAKQP VLESYQAKAN AALDNAIGWN KLKPKMVDLY TRTFTEQELK DLVKFYESPL GKKVLREMPK VTQQSAQLTQ QSLEPAVPVV NKLLEDMTKE LDPNAGKAAA PAKK
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