| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3948 |
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| Symbol | mtnA |
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| ID | 5190585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4452530 |
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| End bp | 4453606 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588421 |
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| Product | methylthioribose-1-phosphate isomerase |
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| Protein accession | YP_001269256 |
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| Protein GI | 148549154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
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| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0029579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0349514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGAGC GACTTTTGGC GGCGGAGAAG GTGACCGCGA TCCGCTGGCA GGGCGGCGCC
TTGCACCTGC TCGACCAGCG CCTGCTGCCG TCGGAGGAGC GTTGGCTGGC CTGCGACAAT
GTTGCGCAGG TGGCCGCAGC CATCCGTGAC ATGGCCGTGC GCGGCGCCTC GGCGATCGGT
ATTGCCGCAG CTTACGGCCT GGTACTGGCC CTTGAAGAAC GGCTGGCCGA AGGCGGCGAT
TGGGAAATGG ACCTGGAAGA CGACTTTCTC ACCCTCGCCG AAGCGCGTCC TACCGCCGCC
AACTTGTTCT GGGCGCTGAA CCGCATGCGC GAGCGTCTGC TGCGCCTGCG TCCGGAAGAA
GACGTTCTGG CGGCGCTGGA GGCCGAAGCG GTGGCCATTC ACGAAAGCGA CCGTGAGGCC
AACCTGACCA TGGCCCAGCA GGGTATCGAG CTGATCCGTC GTCATCAGGG CAATGCGCAG
GCCCTGCTCA CCTTCGGCAA CGCCGGCGCC CTTGCCAGTG GCGGCTTCGG CACCGCACTG
GGGGTGATCC GTGCCGGCTA CCTGGAAGGC ATGGTCGAGC GGGTGTATGC CGGTGAGACT
CGTCCTTGGC TGCAGGGCTC GCGCCTGACG GCCTGGGAGC TGGCCAACGA GGGAATTCCG
GTGACCCTGT GCGCCGACTC GGCGCTGGCG CATCTGATGA AGACCAAGGG CATCACCTGG
GTGGTGGTGG GCGCGGACTG CATCGCTGCC AATGGCGACG TGGCCAGCAA GATCGGCACC
TACCAGTTGG CGGTCAGCGC CATGCACCAT GGTGTGCGCT TCATGGTGGT GGCGCCGAGC
ACCAGCATCG ACCTGAACCT GGCAACCGGC GAGGATATTC CCCTGGAAGA GCGTGACGCC
GACGAGTGGC TGGACTTTGG CGGTGCCCCG GCGGTACGGG ATGTGCAGGT ATTCAACCCG
GTGTTCGACG TGACCCCGGC CGACCTGATT GACGTTATCG TGACCGAACG GGGTGTTGTC
GAGCGCCCGG ATACCGCCAA ACTGGCCCAG TTGATTTGCC GCAAGCGCCT GCACTGA
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| Protein sequence | MRERLLAAEK VTAIRWQGGA LHLLDQRLLP SEERWLACDN VAQVAAAIRD MAVRGASAIG
IAAAYGLVLA LEERLAEGGD WEMDLEDDFL TLAEARPTAA NLFWALNRMR ERLLRLRPEE
DVLAALEAEA VAIHESDREA NLTMAQQGIE LIRRHQGNAQ ALLTFGNAGA LASGGFGTAL
GVIRAGYLEG MVERVYAGET RPWLQGSRLT AWELANEGIP VTLCADSALA HLMKTKGITW
VVVGADCIAA NGDVASKIGT YQLAVSAMHH GVRFMVVAPS TSIDLNLATG EDIPLEERDA
DEWLDFGGAP AVRDVQVFNP VFDVTPADLI DVIVTERGVV ERPDTAKLAQ LICRKRLH
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