| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3934 |
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| Symbol | |
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| ID | 5193688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4432766 |
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| End bp | 4433671 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640588407 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001269242 |
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| Protein GI | 148549140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.278537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTTC TGTTGCTGGG TAAAGACGGA CAGGTTGGCT GGGAGTTGCA ACGTGCCCTG
GTAGTCATGG GTGAGATCGT CGCCTTGGGC CGGAATCCGG TGTCTACCTC ATATGGCACG
CTCAGCGGTG ATTTGTCGGA CCTGGACGGG TTGCGCCAGA CCATCCGTGC TGTTGCGCCT
GATCTTATCG TAAATGCCGC AGCGTACACT GCTGTCGACA AGGCGGAGAC TGAGCAGGAA
CTCGCCCGTA AGGTCAATGC CTTGGCTAGC GGGGTGATTG CTGAAGAGGC AAAGCGTCTG
GATGCATTGT TCGTGCATTA CTCCACGGAC TATGTGTTCG ATGGTGCGGG TACAAGCCCC
TGGAAAGAAA GTGATAGCGT ATCGCCGGTA AACTATTACG GCGCCACCAA GTTGGAAGGC
GAGCAGCTGA TCGTCGCCTC AGGTTGCAAC TATCTGATTT TCCGGACCAG TTGGGTCTAC
GCGGCAAAAG GGAACAATTT TGCCAAGACC ATGCTGCGCC TCGCTAAGGA ACGACAGACA
CTGAATGTCA TTGCGGACCA GATTGGTGTG CCGACCAGTG CCGAGCTATT GGCCGATGTT
GCAGTGCATG CAGTGCAGAA GACACTGAAC AATCCCAGCT TGTGCGGGAT TTACCACCTG
GCTCCCGCGG GTGAGACGTC TTGGCACGCA TACGCGACAT ATGTCATTGC GTCTGCGCGA
GCACACGGCG AGCCGTTAGC AGTGGAAACG ATCAATCCAA TTGCTACCAC GGAATATCCG
ACGCCTGCAA ATCGTCCGTT GAACTCACGT CTGGATACAA CAAAGCTACG CGATGCTTTC
GCTTTGCAAT TGCCGGACTG GAAAGTCGGT GTAACTCGAA TGCTCATGGA AATCTTGAAT
AAATGA
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| Protein sequence | MKVLLLGKDG QVGWELQRAL VVMGEIVALG RNPVSTSYGT LSGDLSDLDG LRQTIRAVAP
DLIVNAAAYT AVDKAETEQE LARKVNALAS GVIAEEAKRL DALFVHYSTD YVFDGAGTSP
WKESDSVSPV NYYGATKLEG EQLIVASGCN YLIFRTSWVY AAKGNNFAKT MLRLAKERQT
LNVIADQIGV PTSAELLADV AVHAVQKTLN NPSLCGIYHL APAGETSWHA YATYVIASAR
AHGEPLAVET INPIATTEYP TPANRPLNSR LDTTKLRDAF ALQLPDWKVG VTRMLMEILN
K
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