| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3926 |
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| Symbol | |
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| ID | 5193896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4420626 |
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| End bp | 4425155 |
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| Gene Length | 4530 bp |
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| Protein Length | 1509 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640588399 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001269234 |
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| Protein GI | 148549132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.554209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.869546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC TAGAACAACA TGGCTATACC AAAGACCGCG ATACTGAAGT GTGGGTCCGT
TCCGACTTTG GGGGCATCGC CTACAGCGAC GGCGATAGCA GCGAAACCGA GTTGGCGAAG
ATTATTCGCG AGGCCAGCGA CGTCTCTGTC CTATCCGATG AGCTCCCTCA ATACTGCACG
GACTGGGCGA AGCTCTACCA TCTGAGCGCG GTGCGCGGCA ATATCCTGCG CCCGTTCGAA
CATCTACTCA AAGGGCGTGT TCTCGAAATT GGCGCAGGCT GCGGTGCTAT CAGCCGTTAC
CTGGGCGAGT GCGGCGCCGA ACTGCTCTGC CTGGAAGGCA GCCCGCGCCG GGCAGCCATT
GCCGCCAGCC GAACGCGCGA CCTGGACAAC GTGACCGTGC TGGCGGAGCG CTTCGACGAT
TTCAAGGTCG ACGTGCAGTT CGACGCCGTG ACCCTGATCG GCGTGCTCGA ATACGCCAGC
ATGTTCAGCA ACGCCGAAAA CCCCGCGCTC GCCATGCTCA AACGCATTCG TCAGTTGCTA
AAGCCAGACG GTCATCTGTT CATTGCCATC GAAAACCAGC TTGGTCTCAA GTATTTTGCG
GGCGCCCCGG AAGATCACGT GGGCATTGCC ATGTACGGCA TCGAAGGCCG CTACCAACAC
GGCCAGCCCA AGACCTTCGG TAAGGTAGAG CTGGAAAGAT TGCTCGCCTC CGCCGGCTTT
GAAGCATCCG ATTTTATGGC TCCAAGCCCG GACTACAAAC TCCCCAACTC GATCATCACT
GAAGCCGGCT TCCAGTGTGA TGCGTTCGAT GCTGCGGCGC TTGCCTGGCA GAACGTCAAG
AAAGACCCTC AACTGCCAGA GTCGACCACC TTCAACCTGG AAAAAGCCTG GCAGGTGGTG
TTCAACAATC GTCTGGGCAT GGATCTTGCC AACTCCTTCC TGATCAAAGC AGCCTGCAAA
AAAAACGATA GCCAGAAAAA CGATATCCTC GCCTATCACT ACAGCATCGG CAGAAGGACC
CGCTATTGCA AAGAGTCATT GTTCGTCATG ACTGACGACG GCATTCAGGT CGAATACAAA
CAACTGGCCT CCTCCGCTAC CCCTTCCGAG AATGAAGACA GCAGCGCATT CAAGTACGTA
CTGCCCCGCA TTGATGCATA CGCCGCCGGC AAGGTGCTAA GCCTTGATTT TCTGGATAGC
GCCGCTCACC ACGACTGGAG CATTGACAGC TTTGCGCCCT TTATAAAGAC CTACCTCGCC
TGCCTGGCGA CATTGCTCAA GCAAGATGGG GCAGATGTCG ATCTGCGCTC AGTCGGCGCG
GTGCTTCCCG GCCACTACAT CGATGCCGTG CCACAGAACA TCGTGCTGAG ACCTGACGGC
ACGCCGCAGC TCATCGACGT TGAATGGGAG ATGATCGGGG GTGTCGAACT TGGTCACCTG
ATGATGCGCG CGTTACTGCT GCTCATGGCC GCAGCGAACC CGTTCTATCC CAGCGCAGCC
TCCTTCAGCC GCCAAGAGTT CACCATGGGC CTGCTGGCGA GCGCAGGGCT GGACATCAGT
CGTGAAGATT GCGAGCGCTA CATTGCGCTC GAGGCGGCAT TTCAGGAGAA AGTCACAGGA
AAGAAAGCCG ACCGTTTCTT GGACTGGGCA CCCGAAGCCC TGATTCACAA GCTGGGCAGC
ACACAATCAA CGTCGAAATT CGCGACGCTG TATATCAGTG ACGCGCATGG CAACTTCTCT
GAACAGTCAG CACTGCGCCA CGAGGTCAGT GATGGCCCGC AACGGCTCCA GTTCGCTCTC
CCCAGCCCGC TCGCAGCCTC TACTGTTTTC CGCTTCGATC CCGTGGATCA GCGGCAGGGC
TTCTCGATTG AAAGCATAAA GGTATATTCT GGCGCCCGAT GTGCCTGGGA ATGGCCAGGC
GAACTCAGCC TGCCGCTAGC GGCAATGTTC GCGTGGAAGA TCCCTCGCGC GGATGATTCG
CTCTACCTCG CTCTGACTGA CGATCCCAGC CTGACGCTTC CCGTGGACAT GGAAACGTTG
CAAATCGGCG AGCAGCTCGA GCTGGAAATC AGCCTTACTA TATTCACGGA CGCGCAGTTG
GCTCGGGAGG TCAACATGCT GAATCAATCT GGACATGTAA GTCCTGTCAC GGACCTGCAA
AGTAAACTTG ATCTGATCGT CGACTCGAAC AAAGAAATCG CTCATGCCCT GGCGCATGTC
AAAGCCTCTG TCAGCCAGAG CACTGTTCTT GCAGAACTCA GCGAGTCCCT GCTTGCGAAG
GACAGGAAAA TTCATGAGCT GTCGACTCAG CTGCAGAAGA AGGTCCAGCA ACAAGAGGCC
CTGGCCCAGG TGCTGCACGA GCAGCAGATG ATGGGGCTGA ACGCCGGCGA AGCGAAAGAT
CCGGAGCTGC TCGGCGTTCC AGCGCTGCAG GCATCCATCG CCAGATGGCA AGAGTCTCTT
GCCCAGAAGG ACGAACACAT TCGTAACCTC GAAGAGCGTC TACATGTTCT GCAGGTCGAT
AAAGACACCC ATATCCACCA CCTCAATCTG CACATCATCG GCATGCAGAA GTCGACCAGC
TGGAAGGCGA CCGCCCCGGC CCGAAAGCTC ATCACACTGA CACGCAGGCT CAACAGAGGG
CTCAAATTAC TGCCATCGGT GATCCGACGT GGTGGCGGCT TGAAAAGCAC TGTTCGCAAG
ACCATCAGCG TATGGCGCCA GCATGGCACA GCCGGGCTGA TCGCTCGAGC TCGCTGGGTC
GCGAACCCGG GCAGTTCCAG CTTAGTAAGC CCGGAAAGTG GCGAGGTCAT CCATAGCCAT
GACTACGCGA GCTGGGTGAA GCTTTATGAC ACCCTGGACG ATAATGATCG CTGGCGAATC
AGCGAAGAAA TCAGGCAGTG GAAAGACCAG CCTCTGATTT CGATCATCAT GCCGGTTTAC
AACCCGCCAA TGGATCTACT GCGCGAGGCT ATCGACAGTG TCACTGCCCA GCTTTACAAG
AACTGGGAGC TTTGCATTGC CGATGATGCG TCCACTGACC CTGAAGTCAT TGCCTATTTG
AAAGGGCTGA CCAAACAGGA TCAGCGGTTC AAGGTGGTGC TACGCGAAAA GAATGGCCAC
ATTTCCAAAG CCAGCAACTC GGCACTGGAG CTTGCAAGCG GCCGATACGT GGCACTCATG
GACAATGACG ACCTGCTGCC GGCCCACGCC CTTTATTGGA TCGCGCGAGC CGTTCATGAA
AACCCCGACG CTGCCGTCAT TTACTCGGAC GAAGACAAAA TCGACGTCGA GGGTAATCGC
TCGGCCCCTT ATTTCAAGAC TGACTGGAAC CTCTATCTCT TCCGCTCACA CAACATGATC
AGCCACCTTG GCGTATACCG CCGGGACCTG GTACAGCGGG TTGGCGGCTT CCGAGAAGGC
ATGGAAGGCT CACAAGACTA CGACCTGGCG TTGCGCTGCG TCGAACAAGT CAGGCCCGAT
CAGATCGTTC ATATTCCGCA TGTTCTCTAC CACTGGCGCG TTCACCCTGG CAGCACGGCT
ATGTCGCTGG GTGAAAAGCC ATATGCACAG ATTGCCGGTC AGAATGCACT GGACCAGCAT
CTGCAACGTA CAGGTATCAA GGGCCACGCC GAGCTTCTGG ATTTCGGTAT GTACCGGGTC
CACTACGACC TCCCGGCAGA TCAGCCGCTG GTTTCCCTGA TCATCCCTAC TCGCAATGCT
GTTGGGTTAG TGCGCCAGTG CATTGAAAGC ATAACGAGCA AGACCAGCTA TCAGCACTAC
GAAATCATTC TGGTGGATAA CGGCTCTGAT GATCCAGAAA GCCTCCAGTA TTTCGAGTCA
CTCAAACTGC AGCAGAATAT CAGGGTGCTC CGTGACGATG GGCCATTCAA CTATTCGGCC
CTGAACAATC GTGCGGTCCG TGAAGCCCGC GGTGAACTGG TCGGACTGAT CAATAACGAT
ATTGAAGTGA TCAGCCCTGA CTGGTTGAGC GAAATGGTGT CGCTGGCGTT GCAACCTGGC
GCAGGCGCTG TCGGCGCCCG GCTGTGGTAC CCAGATAACC GCTTGCAGCA CGGCGGCGTC
ATCATGGGCC CGCTGACATT GGCCGGTCAC GCCCACAAGA TGCTGCCGCG TGGGCACCAT
GGCTATTTCG GACGTGCGTC GCTGATACAG GGGATGTCTG CGGTCACCGC CGCATGCCTG
ATCGTTCGCA AGTCCATTTT CGAAGAAGTC GGCGGGCTCA ATGAAGTCGA GTTGAAGATT
GCTTTCAATG ACGTTGATTT TTGCCTGAAA GTCATGGCCG CTGGATACCA GAATATCTGG
ACGCCAAATG CAGACTTGTA TCACCACGAA TCGGCGACTC GCGGGCTGGA GGATACGCCC
GAAAAGATTG AGCGGTTCAA AAGCGAAGTT AGATACGTGC AGGAAAAGTG GGCAAAAATT
ATTGCTAACG ATCCGGCATA CAATCCAAAT CTGAGCTTTG AACTCGAAGA CTTTTCACTG
GCATTCCCTC CCAGAATTGC TCAGAAATAA
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| Protein sequence | MNTLEQHGYT KDRDTEVWVR SDFGGIAYSD GDSSETELAK IIREASDVSV LSDELPQYCT
DWAKLYHLSA VRGNILRPFE HLLKGRVLEI GAGCGAISRY LGECGAELLC LEGSPRRAAI
AASRTRDLDN VTVLAERFDD FKVDVQFDAV TLIGVLEYAS MFSNAENPAL AMLKRIRQLL
KPDGHLFIAI ENQLGLKYFA GAPEDHVGIA MYGIEGRYQH GQPKTFGKVE LERLLASAGF
EASDFMAPSP DYKLPNSIIT EAGFQCDAFD AAALAWQNVK KDPQLPESTT FNLEKAWQVV
FNNRLGMDLA NSFLIKAACK KNDSQKNDIL AYHYSIGRRT RYCKESLFVM TDDGIQVEYK
QLASSATPSE NEDSSAFKYV LPRIDAYAAG KVLSLDFLDS AAHHDWSIDS FAPFIKTYLA
CLATLLKQDG ADVDLRSVGA VLPGHYIDAV PQNIVLRPDG TPQLIDVEWE MIGGVELGHL
MMRALLLLMA AANPFYPSAA SFSRQEFTMG LLASAGLDIS REDCERYIAL EAAFQEKVTG
KKADRFLDWA PEALIHKLGS TQSTSKFATL YISDAHGNFS EQSALRHEVS DGPQRLQFAL
PSPLAASTVF RFDPVDQRQG FSIESIKVYS GARCAWEWPG ELSLPLAAMF AWKIPRADDS
LYLALTDDPS LTLPVDMETL QIGEQLELEI SLTIFTDAQL AREVNMLNQS GHVSPVTDLQ
SKLDLIVDSN KEIAHALAHV KASVSQSTVL AELSESLLAK DRKIHELSTQ LQKKVQQQEA
LAQVLHEQQM MGLNAGEAKD PELLGVPALQ ASIARWQESL AQKDEHIRNL EERLHVLQVD
KDTHIHHLNL HIIGMQKSTS WKATAPARKL ITLTRRLNRG LKLLPSVIRR GGGLKSTVRK
TISVWRQHGT AGLIARARWV ANPGSSSLVS PESGEVIHSH DYASWVKLYD TLDDNDRWRI
SEEIRQWKDQ PLISIIMPVY NPPMDLLREA IDSVTAQLYK NWELCIADDA STDPEVIAYL
KGLTKQDQRF KVVLREKNGH ISKASNSALE LASGRYVALM DNDDLLPAHA LYWIARAVHE
NPDAAVIYSD EDKIDVEGNR SAPYFKTDWN LYLFRSHNMI SHLGVYRRDL VQRVGGFREG
MEGSQDYDLA LRCVEQVRPD QIVHIPHVLY HWRVHPGSTA MSLGEKPYAQ IAGQNALDQH
LQRTGIKGHA ELLDFGMYRV HYDLPADQPL VSLIIPTRNA VGLVRQCIES ITSKTSYQHY
EIILVDNGSD DPESLQYFES LKLQQNIRVL RDDGPFNYSA LNNRAVREAR GELVGLINND
IEVISPDWLS EMVSLALQPG AGAVGARLWY PDNRLQHGGV IMGPLTLAGH AHKMLPRGHH
GYFGRASLIQ GMSAVTAACL IVRKSIFEEV GGLNEVELKI AFNDVDFCLK VMAAGYQNIW
TPNADLYHHE SATRGLEDTP EKIERFKSEV RYVQEKWAKI IANDPAYNPN LSFELEDFSL
AFPPRIAQK
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