| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3923 |
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| Symbol | |
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| ID | 5195356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4417908 |
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| End bp | 4418453 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640588396 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001269231 |
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| Protein GI | 148549129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.380883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCCA CTCACCTTGC GATTCCGGAT GTTGTTCTTT TCGAGCCGAA GGTTTTCGGC
GATCAGCGGG GATTTTTCTA CGAAAGCTTC AATCAGAAGG TGTTTGAAGA GGTTGTAGGT
AGGTCGGTCA CGTTCGTTCA GGACAACCAT TCCAAATCGG TGAAGGGCGT GCTTCGCGGC
TTGCACTACC AGATAAAGCA TGCGCAAGGC AAACTGGTCC GGGTAACGCA TGGCGAGGTT
TTCGATGTTG CCGTGGATCT GCGCAAGAGC TCACCAACCT TTGGCCAGTG GGTTGGCGCT
CATTTGAGCT CAACCAACCA GCATCAATTG TGGATCCCCG AAGGCTTCGC CCATGGTTTC
GTCGTGCTTT CGGAAACCGC TGAGTTCCTC TACAAGACCA CCGATTACTG GGCACCTAAG
TTCGAGCGCA GCCTGGCCTG GAATGACCCA ACCGTGGCGA TCGAATGGCC TTATACCGAC
GCACCGACCT TGTCCGCCAA AGATGACATC GCTGCCCTGC TGCAGGATGC AGAGGTGTTT
GAATAG
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| Protein sequence | MKATHLAIPD VVLFEPKVFG DQRGFFYESF NQKVFEEVVG RSVTFVQDNH SKSVKGVLRG
LHYQIKHAQG KLVRVTHGEV FDVAVDLRKS SPTFGQWVGA HLSSTNQHQL WIPEGFAHGF
VVLSETAEFL YKTTDYWAPK FERSLAWNDP TVAIEWPYTD APTLSAKDDI AALLQDAEVF
E
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