Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3921 |
Symbol | |
ID | 5193544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4408325 |
End bp | 4415824 |
Gene Length | 7500 bp |
Protein Length | 2499 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588394 |
Product | Beta-ketoacyl synthase-like protein |
Protein accession | YP_001269229 |
Protein GI | 148549127 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.802024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCAAGC GTAGAAAGGT TGCAATCGTC GGTTGTGCGT ACCGTTTTCC TGGCTCTTCC AATGCGGGCT TCTGGCAAAA CCTGATGGAG GGCCGCGACC TGGTGACCCA GGTTGACCCG TCGCGCTGGA ACAAACGCGA GTTCCTGCAC CCGGACAAGG CCAGCCCTGC AACCAGCTAC ACCTTCGCCT CAGGCACCTT GGGTGATATC AGCGCTTTCG ACGCTGGCTT CTTCAGCATC TCGCCGCGTG AAGCCGCGAT GATGGACCCG CAGCAGCGCA TGTTGCTGGA AATGTGCTGG GAAACCTTCG AAAACGCCGG GGTCAAGCCG TCCAGCCTGC GTGGCAGCAA CTGTGGCGTG TACCTGGGCA TCGCCGGTGT CGAGCAGTCC TACCGCCTGC TCGAGGACCT GTCGGCCATC GATGGCGCCA CGGCGACCGG CAACACCATG AGTATCGCGG CCAACCGCCT GTCGTTCTTC TACGACCTGC GAGGCCCGAG CATGGCCATC GACACCGCCT GCTCGTCGTC GCTGGTGGCC TTCCACCAGG CGTGCCAGGC CATCCTCAGC GGTGATGTCG ACCAAGCCGT GACGGGCGGT ATCAGCCTGC ACATGCACCC GTTCGGTTTC ATGATCTTCG CCAAGGCGAC CATGCTGTCG CGCACCGGGC GCTGCCAGTC GTTCGACGAA AACGGCGACG GTTACGCCCG CTCCGAAGGC GGCGGGTTGT TCCTGCTCAA GGACTATGAC CAGGCAGTGG CCGACGGAAA CACCATTTTG GCGGTGGTGG CGGCCAGTGC GGTGAACACC GACGGGCGCA AGTCCAGCCT GACCCTGCCC AATGCCGAGG CCCAGGCGGC GTTGCTCAAG CGCGCCTACA CCCAGGCCGG CATCGCCCCC GAGCAGTTGG ACTACCTGGA GGCCCACGGC ACCGGTACCG CTGTGGGGGA CCCAATCGAA ACCCGCGCCA TCGGCGAGGC GCTGGGCCAG GCGCGCGGCG CCGGTAACCC GCTGCCAATC GGCTCGGTGA AAAGCAACCT CGGGCACCTT GAAGCCGCCT CTGGCGTGGC TGGCCTGATG AAGGCACTGA ACTGCCTGGC TGAGCGTACC GTGCCCGCTA CCATTGGCGT GCAGGCGCTC AACCCGAACA TCGCGTTCGC CGACCTCAAC CTGCAGGTGG TCACCGAGCC CCTGCCGCTG AAAGCCGATG GCCAGTTGAC CGTGGGGGTG AACTCGTTCG GCTTTGGCGG CGCCAACGCC CATGTCATCC TGCAAAGCCC CGAGCTACAG GCGCCGGTAA CGCAAGCGGC CAGCGCCCGG CGCGTGCCGT TACTGCTCAG TGCCAAGAGC GAAGAAGGCC TGCGCGCAAC CGCAGAGCGC TTTGCCGCCT ACCTGGCCGG GCAGCCGCAG GCCGACTATT ACGATGTGGC CTACCAGGCG ATGTTCCGCC GGGATGCGCA CAGCCATCGC CTGCTGCTGG TTTGCGACAC TGCAGCCGAA GCTGCCCAGG CGCTGGACGA CTATGCCCAG GACCCGACCC TCAGCGAACT GAGCGCAGTG CTGGAGGCCG GCCAGGCCCT GGACGGCGCC TCGGCACCGG TATTTGTCTA TTCCGGCAAC GGCTCGCAAT GGCAGGGCAT GGGCCGGGCG ATGCTCGACC AGCCGCTGTT CGCCGCCGCC GTGGATGAAG TGGACGCGTT GTTCCAGCCC TTGGCGGGCT ACTCGCTGCG CGCCGAGCTG CTGGGTGATA ACGGCGAAGG CCGCTATGCA CGTACCGAAA TCGCCCAGCC TGCGCTGTTT GCCCTGCAAG TGGCGGTTAC CAAAGTGCTG GCTGCCGAAG GCATCCACCC GGTGGCGGTG ATTGGCCACA GTGTGGGTGA AGTGGCCGCG GCCTGGGCCA GCGGCGCGTT GAGCCTGGAG GACGCCACCC AGGTCATCTA CCACCGCAGC CGCCTGCAGG GCCTGACCCG TGGTACCGGT AAGATGACGG CGGTCGGCCT CTCGGGTGAA GCCACGGCGC AGCTGATTGC CGAACTGAAA CTGGACGGCC GCCTGGTGGT GGCGGGCGAG AACAGCGCCC GCGGCGCCAC TGTGGCCGGT GAGGTCGACG CCCTGGCACT GCTGGAGGCG GCCCTGGAAG AGCGCCAGGT ATTCGCCCGT CGCCTGGACC TGGACTACGC CTTCCACTCG CCGGCCATGG ACCCGATCAA GCAAGCGGTT ATCGACGACC TCGCGCATAT CCGCCCGCAG GCTACGAAGA TTCCGTTCTA CTCCACTGTT GTTGGTGGCC AGTTGAACGG CGAACGCCTG GACAGCCAGT ACTGGTGGCA GAACATTCGC TTCCCGGTGC TGTTCCAGGG CGCGCTGGCT GCCTTGGTGC GCAATGGCCT TAACCTGTTC GTCGAAGTGG GCCCGCATGC GATTCTGCGC AGCTACGTCA GCGATGTGCT GGTCGAGTGC GAACAACCGG GGCAGGTGAT TGGCACCCTC AAGCGCAACG ACCACAGTCC GCTGCTGCTG GAACGTACCG TAGCTCGCCT GCAGATTGCC GCCGTGGAGC CAAAGTGGCA GGCACGCTTC CCGGTGACGG GGCGCCCGCT GCGCCTGCCT AACTACGCCT GGCAGCGCGA TCACTTCAGC TTGCCGGTCA CTGCCGAGGC CTATGGCCCG CTGAGCCACG AGCGCGTGCA CCCGTTGCTG GGTTACCCGG TAACAGACCA GGCGCTGACC TGGGAAAACC GCCTGGATAC CCAGCAGTAC CCGACCCTGG CCGACCACAA GGTGGGTGAG TCGGTACTGT TCCCGGGTGC AGGCTTTACC GAGCTGGCCC TGGCGGTGGC GCAACTGCAC CAGCCGGGCG AGTTCGTCGA TATCGAAGAG CTGGAAATCC ACAACCCTCT GCTGCTGAGC AGCGAGGTCA GCAAGAAAGT GCGCGTGCAG GTGGAAGAGG CCGATGGCAC ATTGCGCATC AGCTCGCGCA CGTTGATGCA ACGCGAAGAC TGGGTACAGC ACGTGGTCGC ACGCTTGCCG GGCGAAGCGC GCGGTGTGCT ACTGGACACC CGGGCACCGG CGTTGCCAGC CCGCCCGGCA GACTTCACCG GCGAGCAGCA CCTGGCAATG ACCTGCGCGG TTGGCCTGAA CTACGGCCCC GCTTACCAGA CGGTGGCCGC AGCCTGGGTG GAAGGGGAGC GCGTGCTGGC TCAGTTGGTC GTGCCTGCTG CCATCGAACA CGAACTGGCA AGCCTGCACC TGCACCCGGC GCTGCTGGAT GGTGCCTTCC AGCTGATTAC CGAGCTGCTG GCCAGCCGCC AGGGGCATGA CGATGGCCTG GCGTTCATCC CCGTCAAGCT TGGGCGCATT GCCTTTACCA ATGCTGGTGG TGTGCCGGTG CTGGCCGAGG TGCGCCAGCG CAAGCGCACC GCGCATTCGC TGCTGGTCGA CTTCACCCTG TTCGATGCCA GCGGCGCTGC CGTGCTGGCA ATCAAGGATG CGCGCATGCG TGCCGTGCGC CTGCAGTACG ACCGCAGTGG CGACATCAAG CGTATGGGCC ATGTGGGGCA GGCCGCGCCA GGCGCGGTTG TGCCTGTGCA GCGTAACGCC GTGGCCTGCT CGCCGCTGGC TGAGGCCTTG CAGTGCCTGG CCGACGAGCC GGCACAGGTG CGTTACCTGA ATGAAGTGGA GCCACTGCTG GATGTGCTGT GCAGCAGCTT TGTCCTCGAT GCGGTGGAAC AGGCCGGCGG CCGCATCAGT GCCGAGCAGG TCGCGCAGTG GTCGCAGGGC CAGGGCGACT TCCTGGCGAT GCTGTTGCGC CATGCCGAGC ACGACGGCAG CCTGCAGCGT AGCGCGGACG GCAGCTGGCA ATTGGTCGAC CAGGGCGAGC GCCCGACCTC GCAGGTTATC TGGCAAGAGC TGTTCAGAAG CTACCCCGAG TACTTCCAGA TTATCCATTC CGTGGGCCGT ATCGGCCGTC ATCTGTCGGC GTTGCTGGAT GGCAGCCAGG CCTTCGACAC TCTGCAACCG CGCGAAACCA GCGGTGCCAG CCTGGCGCGC CTGGTGCTGG GTGCGGCAGG GCAGCAGCAC CTGCTCAGCG GCATTGGCCA GACCCTGGCC GCGCGCCTGG CGCAACTGCC GCCCGGCCAG CGCCTGCGGG TGCTGGAATT CGGCTTCGGT GGCGCTTCGT TTGCCGAGCT GTTGTACGCC GGTCTGGATT TCGATCGCCT CGATTATGCC TACTGCGTCG CCGAGCCTGA GCTTGAGCAG CGCCTGCGTG ACGATTGCCC GGCGTTGGAG GTACTTGGCC TGGAGCAACT GGCCGAAGCC GGTACGTTCG ACTGGGTGCT GGTGCCTACC GACTTCGGCC CCCTTGGTAC GGTGGGTGAC GCCCTGCGCC TGGCCAGTGG TCGGCTCAAC CCGCACGGCC AGTTGGCGCT GCTTGGGCAG TACCCGGCGC GCTGGGCCGA TTTCGTCTTC GGTGCCCAGC CAGATTGGTG GCTGGCCGGC CCGCAGCAGG CGTTGTCGCG CCAGCAAGGC CCGGCGTTCT GGAGCCATGA GCTGCAGCGG CATGGCCTGA CCGCGCTGCG CACGCTGGAG GCGTTGCCGG GTAACGCCTG TGGTAGCTAC CTGTTGCTGG CGGACAAGCC CGCCGGTGCT GACACTGCTG CACCCGTGGC CGTGCAGCGC TGGGCCGTAC TCGCCGAAGC CGGGCAGGGC GCAGCCCTGC GCCTGGCACA GCAACTGCGC GCCCAGGGCC AGCAGGTTGA CCTGTTGCAG CCGGGTGACG CCCAGGCGCT GGCGGCCCAG CTTGGCGCCT TTGCCCAGCC CCCTGAGCAT GTGCTGCACC TGGCTGGTTT CGACAGCGGC ACAGGCCTCG ATGGCCAGGC CGAGCGCTGC ATGCAAGCGG CCGCGCTGGT GCAGGCCTGT GAGTCGCTGA CGATCGCCCC GCAGTGCTGG CTGTTCAGCC GTGGCGCTGC CGAGCACCTG TACAGCGTCG ACACCGCCGC TGAGGTTGCG GCCATCGGCG ACGCCGCCTT GTGGGGCTTT GGCCGTACCC TGGCCAACGA ATCCCCGCAC TGTCGTATTC GCCTGCTCGA TCTGGCCCAC GCGGCAGCGG TCGAGCTGGC GGTACCTGCG TTGCTGCACG CCGACAGCGA AACCGAGCTG GCCCTGGACG CCGAAGGCCG TCGCTACGTG CCGCGCCTGC GCGTGCTGGC CGACCAGCCG CGCCGCGCAG TGGGCGATGC ACAGTGGGTG TGCCTGGGCT TCGACCTGCC GGGCCAGCTG CGCAACCTGC GCTGGGAGGT GCGTGAGCCG CGTCAACCGG CGGCGGATGA GCTGGACATT CAGGTGCGTG CGACGGGCCT TAACTTCCGT GACGTGATGT TCGCCCTCGG CCTGCTGTCG GATGAAGCCA TCGAAAACGG CTTCTCCGGC CCTACCTTGG GCTTCGAATT TGCCGGTGTG GTGCAGGGCA AAGGCGCCGA GGCAGTGGGC GACTTCGCCC CGGGTGACCG TGTGGTGGGC TTTGGCCCCT GCAGCTTCGC CAACCGCCTG GTCACCAACG CCAACGCCGT TGCACGCATC CCCGAAGGGA TGTCGTTCGA AGCGGCGGCC ACCATTCCGA GTACCTTCTT CACCGTGTAC TACGCGCTGC ATCACTTGGC GCGCCTGGAG CCGGGCGAGA AGGTGCTGAT CCACGGCGCT GCCGGTGGCG TGGGCATCGC GGCCATCCAG ATCGCCAAAT GGCTGGGCGC AGAAATTCAC GCCACCGCAG GCAGCGACGA GAAGCGCGAC TTCCTGCGCC TGCTGGGCGT CAGCCACATC TACGACTCCC GTTCGCTGGC GTATGCCGAC CAGGTGCTGG CAGCCACCGG TGGGCGTGGC GTGGACGTGG TGCTCAATTC GCTGGCCGGT GAGGCCATCA ACCGCAACCT GCAGGTGCTG AAGCCGTTTG GTCGCTTCCT GGAGTTGGGC AAGCGCGACT TCTACCAGAA CACCCGTATT GGCTTGCGCC CGTTCCGCAA CAACATCAGC TATTTCGGTA TCGACGCTGA CCAGCTGATG AGCGAGCGCC CCGCGTTCAC CCGCCGCCTG TTCGCCGAGA TGATGGAACT GTTCGAGCAG GGCATCCTGC ACCCGTTGCC GTTCCGCGAG TTCGACGCCA ACCAGGTGGT CGAGGCCTAC CGTTACATGC AGCAGGCGCG GCAGATTGGC AAGGTCGTGG TGACGTACGC CAACCCGATC CAGCAAACCG TCGACACCCG CGTGCAGCCG GTGCGGGCAC TGCAGCTTGC CGCCGATGCC AGCTACCTGG TCACCGGCGG CCTGGGTGGC TTTGGCTTGC GTACTGCGCA GTGGCTGATC GACAAAGGTG CCCGTCACCT GGTGTTGCTG GGCCGTCGTG GCCCGGCCAG TGAAGAGGCC CAGCCGCAGC TGGCGTTGTG GCACGCCCAA GGTATCGATG TGCAGGCCGT GGCGTGCGAC ATCACCGACC GTGAGCAACT GCGCGGGGTG TTTGATCGCA TTGCCGCCAG CCCATGGCCA CTGCGTGGCC TGGTGCACGC CGCGACGGTG ATTGACGACA GCCTGATCCG CAACCTTGAC GGCGACCAGT TGCGTCGCGT GCTGGAGCCC AAGGCCAAGG GTGCGCAGTA CCTGCACGAG CTGACCCAAG GCCTGGCGCT GGACTTCTTC GTGATGTTCT CCTCGGCCAC CACCTTGTTC GGCAACCCTG GCCAGGCCAA CTACGTGGCG GCCAACCACT GGCTCGAAGC CCTTGCGCGG CACCGTCGTG CTCAGGGCCA GGCAGCCACT GCCGTGCTGT GGGGCGCCAT CGACGATGTC GGTTTCCTGG CGCGCAACAG CCAGATCAAG GACGCCCTGC AGAGCCGCAT GGGGGGCTCG GCGCTGCGGG CTGAGGCAGC CTTGGCACAG CTCGAGGCCA TGCTGTTGCA GGGTGATAAC GGCCATGGCG TGCTGGAGCT GGACTTCAAG GCCCTGGCGC GCTTCCTGCC GAGCGCCACT ACACCGCGCT TCAGCGAACT GGCCCGTGCC TATGGCGGCG ACCATGAGGA TGAAGGGGGC GGTGAAGACA TCCAGCGCAT GCTGGAGGAG CTTGACGATG GCGAACTGCT CGAACGCTTC GTAGACATGC TCAAGCACGA GGTGTGCGAG ATTTTGCGCC TGCCGCCCGC ACGCCTGGAT GCCCAGCGCC CGCTGCAGGA AATGGGGCTC GATTCGTTGA TGAGCGTTGA GTTGGTGGTG GCGCTGGAAG AGCGTTTCGG TATTCGCTTG CCGGTGATGG AACTGAGCGA CAGCTCCAGC ATCGACAAGC TTGCCGTACG CTTGCTGGAG CTGCTGCGCG GTGAAGCGAG CAGCGGGGAA GAGCAACTGG CGCAGAATGT GCTTGCCCGC CATGGCAGCG AGCACAGTGC CGAAGAGTTG GCGCAGTTGA ACGCAGCCTT GGCCGACAGC AACGCGGCAC CCAACCGATT GATTGATTAA
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Protein sequence | MIKRRKVAIV GCAYRFPGSS NAGFWQNLME GRDLVTQVDP SRWNKREFLH PDKASPATSY TFASGTLGDI SAFDAGFFSI SPREAAMMDP QQRMLLEMCW ETFENAGVKP SSLRGSNCGV YLGIAGVEQS YRLLEDLSAI DGATATGNTM SIAANRLSFF YDLRGPSMAI DTACSSSLVA FHQACQAILS GDVDQAVTGG ISLHMHPFGF MIFAKATMLS RTGRCQSFDE NGDGYARSEG GGLFLLKDYD QAVADGNTIL AVVAASAVNT DGRKSSLTLP NAEAQAALLK RAYTQAGIAP EQLDYLEAHG TGTAVGDPIE TRAIGEALGQ ARGAGNPLPI GSVKSNLGHL EAASGVAGLM KALNCLAERT VPATIGVQAL NPNIAFADLN LQVVTEPLPL KADGQLTVGV NSFGFGGANA HVILQSPELQ APVTQAASAR RVPLLLSAKS EEGLRATAER FAAYLAGQPQ ADYYDVAYQA MFRRDAHSHR LLLVCDTAAE AAQALDDYAQ DPTLSELSAV LEAGQALDGA SAPVFVYSGN GSQWQGMGRA MLDQPLFAAA VDEVDALFQP LAGYSLRAEL LGDNGEGRYA RTEIAQPALF ALQVAVTKVL AAEGIHPVAV IGHSVGEVAA AWASGALSLE DATQVIYHRS RLQGLTRGTG KMTAVGLSGE ATAQLIAELK LDGRLVVAGE NSARGATVAG EVDALALLEA ALEERQVFAR RLDLDYAFHS PAMDPIKQAV IDDLAHIRPQ ATKIPFYSTV VGGQLNGERL DSQYWWQNIR FPVLFQGALA ALVRNGLNLF VEVGPHAILR SYVSDVLVEC EQPGQVIGTL KRNDHSPLLL ERTVARLQIA AVEPKWQARF PVTGRPLRLP NYAWQRDHFS LPVTAEAYGP LSHERVHPLL GYPVTDQALT WENRLDTQQY PTLADHKVGE SVLFPGAGFT ELALAVAQLH QPGEFVDIEE LEIHNPLLLS SEVSKKVRVQ VEEADGTLRI SSRTLMQRED WVQHVVARLP GEARGVLLDT RAPALPARPA DFTGEQHLAM TCAVGLNYGP AYQTVAAAWV EGERVLAQLV VPAAIEHELA SLHLHPALLD GAFQLITELL ASRQGHDDGL AFIPVKLGRI AFTNAGGVPV LAEVRQRKRT AHSLLVDFTL FDASGAAVLA IKDARMRAVR LQYDRSGDIK RMGHVGQAAP GAVVPVQRNA VACSPLAEAL QCLADEPAQV RYLNEVEPLL DVLCSSFVLD AVEQAGGRIS AEQVAQWSQG QGDFLAMLLR HAEHDGSLQR SADGSWQLVD QGERPTSQVI WQELFRSYPE YFQIIHSVGR IGRHLSALLD GSQAFDTLQP RETSGASLAR LVLGAAGQQH LLSGIGQTLA ARLAQLPPGQ RLRVLEFGFG GASFAELLYA GLDFDRLDYA YCVAEPELEQ RLRDDCPALE VLGLEQLAEA GTFDWVLVPT DFGPLGTVGD ALRLASGRLN PHGQLALLGQ YPARWADFVF GAQPDWWLAG PQQALSRQQG PAFWSHELQR HGLTALRTLE ALPGNACGSY LLLADKPAGA DTAAPVAVQR WAVLAEAGQG AALRLAQQLR AQGQQVDLLQ PGDAQALAAQ LGAFAQPPEH VLHLAGFDSG TGLDGQAERC MQAAALVQAC ESLTIAPQCW LFSRGAAEHL YSVDTAAEVA AIGDAALWGF GRTLANESPH CRIRLLDLAH AAAVELAVPA LLHADSETEL ALDAEGRRYV PRLRVLADQP RRAVGDAQWV CLGFDLPGQL RNLRWEVREP RQPAADELDI QVRATGLNFR DVMFALGLLS DEAIENGFSG PTLGFEFAGV VQGKGAEAVG DFAPGDRVVG FGPCSFANRL VTNANAVARI PEGMSFEAAA TIPSTFFTVY YALHHLARLE PGEKVLIHGA AGGVGIAAIQ IAKWLGAEIH ATAGSDEKRD FLRLLGVSHI YDSRSLAYAD QVLAATGGRG VDVVLNSLAG EAINRNLQVL KPFGRFLELG KRDFYQNTRI GLRPFRNNIS YFGIDADQLM SERPAFTRRL FAEMMELFEQ GILHPLPFRE FDANQVVEAY RYMQQARQIG KVVVTYANPI QQTVDTRVQP VRALQLAADA SYLVTGGLGG FGLRTAQWLI DKGARHLVLL GRRGPASEEA QPQLALWHAQ GIDVQAVACD ITDREQLRGV FDRIAASPWP LRGLVHAATV IDDSLIRNLD GDQLRRVLEP KAKGAQYLHE LTQGLALDFF VMFSSATTLF GNPGQANYVA ANHWLEALAR HRRAQGQAAT AVLWGAIDDV GFLARNSQIK DALQSRMGGS ALRAEAALAQ LEAMLLQGDN GHGVLELDFK ALARFLPSAT TPRFSELARA YGGDHEDEGG GEDIQRMLEE LDDGELLERF VDMLKHEVCE ILRLPPARLD AQRPLQEMGL DSLMSVELVV ALEERFGIRL PVMELSDSSS IDKLAVRLLE LLRGEASSGE EQLAQNVLAR HGSEHSAEEL AQLNAALADS NAAPNRLID
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