Gene Pput_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3919 
Symbol 
ID5192386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4406498 
End bp4406953 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID640588392 
Producthypothetical protein 
Protein accessionYP_001269227 
Protein GI148549125 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0968412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACG CCCACGCCCA CCATCTGCGC CGCCATCGGG TTTCACACCC CGGCAGGCTA 
TACATGCTGA CAACCGTCAC CCACCAGCGC CGCCCCCTGT TTCACAACTT CAACCTGGCC
AGGCTGGTGG TCAATCACCT GCGCCAGGCA GACCGGGAAA ACAGCTGCGC CACGCTGGCC
TGGGTGGTCA TGCCCGACCA TGTGCATTGG CTGATAGAAC TGAAACAGGT GACGCTGGCC
ACGTTGATGC GCCGCTTCAA ATCAAGGTCC AGCCATGCCT TGCACAAGGC TGGTGTAACA
GCCACCCCCA TCTGGCAGGC GGGCTACCGC GATCGCGCCA TGCGCAAGGA TGATGACCTG
CTCAACACCG CTCGGTACAT CATTGCCAAC CCGGTTAGGG CCGGCCTGGC ACCCAATGTC
GGCGAATACC CACACTGGGA TGCCATCTGG CTGTAA
 
Protein sequence
MHYAHAHHLR RHRVSHPGRL YMLTTVTHQR RPLFHNFNLA RLVVNHLRQA DRENSCATLA 
WVVMPDHVHW LIELKQVTLA TLMRRFKSRS SHALHKAGVT ATPIWQAGYR DRAMRKDDDL
LNTARYIIAN PVRAGLAPNV GEYPHWDAIW L