Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3898 |
Symbol | |
ID | 5191850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4378908 |
End bp | 4379243 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640588371 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_001269206 |
Protein GI | 148549104 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.209502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAATA ACGTTCTGTC GTACCTGCTG CTGCCGCTGT TCACCAGTTT GTCGTTCTCC CTTAGCGCCG CCCCGGCCAG CACCATGGCA GTGACCGAAC CGGTGCCGGT GGTGGCCGGG GCCCAGGCAC AGCAGGCGCC GAGGCTGGAC TTGAACACGG CAGATGCACT CACCCTGCAA AAGGAGCTGA ACGGCATTGG CAAGGCCAAG GCGGAGGCTA TTGTGGCCTA CCGCGAGGCC AATGGGCCGT TTGCTTCAGT GGATGAGTTG CTGGAAATAA AGGGCATAGG CAATGCGTTG CTGGAGCGCA ACCGGGACAA GGTGATGGTG GAGTAA
|
Protein sequence | MRNNVLSYLL LPLFTSLSFS LSAAPASTMA VTEPVPVVAG AQAQQAPRLD LNTADALTLQ KELNGIGKAK AEAIVAYREA NGPFASVDEL LEIKGIGNAL LERNRDKVMV E
|
| |