Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3892 |
Symbol | |
ID | 5194046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4372219 |
End bp | 4374159 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588365 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001269200 |
Protein GI | 148549098 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.176231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGA GCAAGCACGG TGTGCTGGCC AACCTGGGCA TGGCCCGCAA ACTTGGCCTG GGCTTTGCCT TGGTGCTGCT GCTGACACTG GCGGTGGCGG CTATCGGCGT CGCGGCGTTG CACAGCGTTG GCCAGCGCTT CGACAGCTTG CGTCAGCTGG CCCAGTTCAA TACCGACTTG CTGCGCTTGC GCGAGCATGA GCAGGCGTTT GCCCTGCGCT CCGACATGCA GCAGGCCGAC GCCTTGCGTG GCGGCCTGCA GGGCTTGGTG GAACGCGCCC GAGGCCTGCC GGCGCTGGCG GCGGCGCAAA CCGATCTTGC GGCCTATGGC CAGGCCTTCG AAGCCTTTGT CGAGGCCGTG CAAGCCAAGG AGCTGGCGCT GGACATGGCC AGCTGGTCGG TGTCCAACGT GTCCAACAAC CTTGATGTGC TGCAGGCCGG CCTGGCCGAT GACGGCGTGT ACACCCTCAA GCAGTCCCAG GGCCAGCAGG GGGGCGAGTT TCTGGAGCAA GCCGCGCAGG TGGCCCAGGT GTCGCGGCTG ATGCTGCAGG CCATGGACGA AGCACGGGTA CGCCTGGAAA AAAGCCGCAA GGGCGAGGAG GGTGTGAGCC AGGAGCGTAT TGCCCAGACG GTGGAGGCCG CTGGCCTGGT CAGTCAGTTG CAAGGCGCGG TTGGCGATGC CGGTTATCAG AGTGTGTTGG GCGAAGTGGC TGGGCACATT GGCAGTTTCT CGGAAAAGCT CAACGAATAC ACCGACCAGC TGGCCCGCGA GCAGGGGCTC AAGGCGCAGT TGCAAGCCAG CGCCGAGCGG GTTACCGGGC GTGTCGACCA GGCCTATCTT GGGCAGGAGC AGGCCCTACA GGGCGAGCTG CAGCGTAATG CCTTGGCCAT CGGCCTGGCC ACGGCGCTGG CGCTGCTTGT AGGCGTGTTG GCGGCCTGGC TGATTACCCG GGCTGTGGTC GGCCCGTTGA AGCATGTGAT TGCCCGTGCC CAGCGCATTG CGGCGGGGGA GCTGGGTTTC GACGCCCAGG CGCCGCGCCG GGATGAGGTG GGGCAACTGA TGCAGGCCAT GCAGCAGATG GCGGCGGGGC TCTCGGGCAT TGTCAGCGGC TTGCAGCAGG GCATCGAACA ATTGGCCGGC AGTGCCCAGG CGTTGTCGAC GGTGACTGAG CAGACCAACC GCGAGGTGGG CAGCCAGAAG GAAGAAACCG AACAGGTGGC GACCGCCATG CAGCAGATGA CTGCCACCGT GCACGATGTG GCGCGCAATG CCGAGGAGGC GGCGCAGGCG GCCCAGGCGG CGGACGAAAA GGTCGACACC GGCCAGCAGG TGGTGCGCCA GAGCATGCAG CGCATCGAGC AGCTGGCGTC GGCGGCAGAA GCTGCCAGCG CCGGCATCGA CAGCCTCAGT GCCGAAATCC ACACCATTGG TGACGTGCTG GAAGTGATCA AGAGCGTGGC CGAGCAAACC AACCTGCTGG CGTTGAATGC CGCCATCGAG GCTGCCCGCG CCGGCGAGCA GGGGCGCGGC TTTGCCGTGG TGGCCGATGA AGTGCGCGCC CTGGCGCGGC GTACCCGGCA ATCCACCGAG CAGATCGAGA CCTTGGTGGC CAGCCTGCGC GGCAATGCCC AGCAGTCAGT GACGCAGATC CGCGGCAGTA CCGAGCTGGT GCGGCTGGCC GTGGCCGATG CACTGCAGAC CGAAAGTGCG CTGGGCAGCA TTGCCGCAGC GGTGTCATTG ATTCAGCAGA TGAACCAGCA GATTGCCGCA GCCGCCGAGC AGCAGAGTTC GGTGGCGGAA GAGATCAGCC GCAGTGTCAC GCAGATTCGT GGCAGTGCGG ACCAGGCGGC GTTGGCGATG CAGGACAATG CCCGGTCCAG TGTCGAGCTG GCGCAGCTGG GCACCGATTT GAAGGGCATG GTGGGGCATT TCAGGTTGTA A
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Protein sequence | MGASKHGVLA NLGMARKLGL GFALVLLLTL AVAAIGVAAL HSVGQRFDSL RQLAQFNTDL LRLREHEQAF ALRSDMQQAD ALRGGLQGLV ERARGLPALA AAQTDLAAYG QAFEAFVEAV QAKELALDMA SWSVSNVSNN LDVLQAGLAD DGVYTLKQSQ GQQGGEFLEQ AAQVAQVSRL MLQAMDEARV RLEKSRKGEE GVSQERIAQT VEAAGLVSQL QGAVGDAGYQ SVLGEVAGHI GSFSEKLNEY TDQLAREQGL KAQLQASAER VTGRVDQAYL GQEQALQGEL QRNALAIGLA TALALLVGVL AAWLITRAVV GPLKHVIARA QRIAAGELGF DAQAPRRDEV GQLMQAMQQM AAGLSGIVSG LQQGIEQLAG SAQALSTVTE QTNREVGSQK EETEQVATAM QQMTATVHDV ARNAEEAAQA AQAADEKVDT GQQVVRQSMQ RIEQLASAAE AASAGIDSLS AEIHTIGDVL EVIKSVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LARRTRQSTE QIETLVASLR GNAQQSVTQI RGSTELVRLA VADALQTESA LGSIAAAVSL IQQMNQQIAA AAEQQSSVAE EISRSVTQIR GSADQAALAM QDNARSSVEL AQLGTDLKGM VGHFRL
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