| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3885 |
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| Symbol | |
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| ID | 5192578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4366879 |
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| End bp | 4367469 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588358 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001269193 |
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| Protein GI | 148549091 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.421083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTC CAACCACGAT GTTTCGCCTC ACTGGCCGCG ACTATCCGCC GGCCAAGCTG
AGCCACGCCA GCCTGATCAT CATCGATGCA CAAAAGGAGT ACCTCAGTGG TCCCCTGAAG
CTGTCAGGCA TGGACGAGGC CGTGGCCAAC ATCGCCAGGT TGCTCGACGC CGCCCGTAAA
AGCGGCCGTC CGATCATCCA TGTTCGCCAC CTGGGCACTG TTGGTGGCCG CTTCGACCCC
CAGGGGCCGG CTGGCCAGTT CATTCCGGGG CTGGAGCCGC TGGAAGGTGA AATCGTCATC
GAAAAACGCA TGCCCAACGC GTTCAAGAAC ACCAAGCTGC ACGAAACTTT GCAGGAGCTG
GGCCACCTGG ACCTGATCGT CTGTGGTTTC ATGAGCCATT CCAGCGTCAG CACCACCGTT
CGCCGCGCCA AGGACTATGG TTATCGGTGC ACCCTGGTAG AAGACGCGTC GGCCACCCGC
GACCTGGCAT TCAAGGACGG CGTCATTCCG GCCGCGCAGA TTCACCAGTG CGAAATGGCC
GTGATGGCTG ACAACTTCGC TTGCGTTGCC CCCACCGCGA GCCTGATCTG A
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| Protein sequence | MSVPTTMFRL TGRDYPPAKL SHASLIIIDA QKEYLSGPLK LSGMDEAVAN IARLLDAARK
SGRPIIHVRH LGTVGGRFDP QGPAGQFIPG LEPLEGEIVI EKRMPNAFKN TKLHETLQEL
GHLDLIVCGF MSHSSVSTTV RRAKDYGYRC TLVEDASATR DLAFKDGVIP AAQIHQCEMA
VMADNFACVA PTASLI
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