Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3843 |
Symbol | |
ID | 5191847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4323086 |
End bp | 4324297 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588315 |
Product | aminotransferase AlaT |
Protein accession | YP_001269151 |
Protein GI | 148549049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0237926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.409513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AATGTCTGCT ACGACATTCG CGGCCCAGTG CTCAAGCACG CCAAACGCCT GGAGGAGGAA GGCCACCGCA TCCTCAAGCT GAACATCGGC AACCCGGCGC CGTTTGGCTT CGAGGCGCCT GATGAAATCC TTCAGGATGT GATCCGCAAC CTGCCCACCG CACAGGGCTA CAGCGACTCC AAAGGCCTGT TCAGTGCCCG CAAGGCGGTG ATGCAGTACT GCCAGCAGAA AGAAATCGAA GGCGTCACCA TCGAGGACAT CTACCTGGGT AATGGTGTGT CCGAGCTGAT CGTCATGTCG ATGCAGGCGC TGCTCAACAA CGGCGACGAA GTGCTGATCC CGGCCCCCGA CTACCCGCTG TGGACTGCCG CCGTGAGCCT GGCCGGCGGC AAGCCGGTGC ACTACCTGTG CGACGAGCAG GCCGACTGGT TCCCTGACCT TGAGGACATC AAGGCCAAGA TCACCCCGAA CACCAAGGCG CTGGTGATCA TCAACCCGAA CAACCCGACC GGCGCCGTCT ACTCCAAAGA GCTGCTGCTG GGCATGCTGG AGCTGGCCCG CCAGCACAAC CTGGTGGTGT TCTCCGACGA GATCTACGAC AAGATCCTGT ACGACGAAGC CGTGCACATC AGCACCGCCT CGCTGGCCCC GGACCTGCTG TGCCTGACCT TCAACGGCTT GTCCAAGTCG TACCGGGTGG CGGGCTTCCG CTCTGGCTGG CTGATCATTT CCGGGCCCAA GCACCACGCA CTCAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG GCCCAGCATG CCATCCAGAC CGCGCTGGGC GGCTACCAGA GCATCAACGA CCTGGTGCTG CCACCGGGGC GCCTGCTGGA GCAGCGCAAC CGCACCTACG AACTGCTCAA CGACATCCCC GGCGTCAGCT GCGTGAAGCC GATGGGCGCG CTGTATGCGT TCCCGCGGAT CGACCCGAAG GTTTGCCCGA TCCTCAACGA CGAGAAGTTC GCCCTTGACC TGTTGCTGTC GGAGAAGCTG CTGATCGTAC AAGGAACGGC GTTCAACTGG CCGTGGCCGG ACCACTTCCG CGTGGTGACC TTGCCGCGGG TGGATGACCT GGAAGCAGCC ATTGGCCGGA TCGGCAATTT CCTGAAGGGT TATTCGCAGT AG
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Protein sequence | MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN LPTAQGYSDS KGLFSARKAV MQYCQQKEIE GVTIEDIYLG NGVSELIVMS MQALLNNGDE VLIPAPDYPL WTAAVSLAGG KPVHYLCDEQ ADWFPDLEDI KAKITPNTKA LVIINPNNPT GAVYSKELLL GMLELARQHN LVVFSDEIYD KILYDEAVHI STASLAPDLL CLTFNGLSKS YRVAGFRSGW LIISGPKHHA LSYIEGIDML ANMRLCANVP AQHAIQTALG GYQSINDLVL PPGRLLEQRN RTYELLNDIP GVSCVKPMGA LYAFPRIDPK VCPILNDEKF ALDLLLSEKL LIVQGTAFNW PWPDHFRVVT LPRVDDLEAA IGRIGNFLKG YSQ
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