Gene Pput_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3803 
SymbolrpmF 
ID5194640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4265454 
End bp4265636 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content56% 
IMG OID640588270 
Product50S ribosomal protein L32 
Protein accessionYP_001269111 
Protein GI148549009 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0333] Ribosomal protein L32 
TIGRFAM ID[TIGR01031] ribosomal protein L32 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC AGCAGAACAA AAAATCCCGC TCTGCCCGTG ACATGCGCCG TTCGCACGAC 
GCTCTGTCGG AAAACGCGCT GTCGGTAGAG AAAACCACCG GTGAAGTTCA CCTGCGTCAC
CACGTTTCGC CAGAAGGCGT ATACCGTGGT CGTAAAGTGG TTGACAAGGG CGCTGACGAG
TAA
 
Protein sequence
MAVQQNKKSR SARDMRRSHD ALSENALSVE KTTGEVHLRH HVSPEGVYRG RKVVDKGADE