Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3798 |
Symbol | |
ID | 5194780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4260746 |
End bp | 4261990 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588265 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | YP_001269106 |
Protein GI | 229328217 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.173209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.510937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCGTA GACGCGTCGT GGTCACCGGT ATGGGTATGC TGTCGCCACT GGGTACCGAT GTACCGAGCA CCTGGCAGGG CATTCTGGCT GGCCGCAGTG GCATCGGTCC GATCGAACAC ACGGACCTGT CTGCCTACTC CACCCGTTTT GGCGGCTCGG TGAAAGGCTT CGAGGTTGAG CAGTACCTGT CGGCCAAAGA GGCCCGCAAG CTCGACCTGT TCATCCAGTA CGGCCTGGCG GCGGGTTTCC AGGCCGTGCG TAATGCCGGC CTGGAGGTCA CCGATGCCAA CCGCGAGCGT ATTGGCGTGG CCATGGGCTC GGGTATCGGT GGTCTGACCA ACATCGAAGA AACCAGCCGC ACCCTGCACG ATTCAGGGCC GCGCCGCATT TCGCCGTTCT TCGTGCCGGG TTCGATCATC AACATGATCT CCGGTTTCCT GTCGATCCAC CTGGGTCTGC AAGGGCCGAA CTATGCCATC GCCACTGCGT GCACCACCGG CACCCATTGC ATCGGCATGG CCGCGCGCAA TATCGCCTAC GGTGAAGCTG ACGTGATGAT CGCCGGTGGC GCCGAAATGG CCGCTTGTGG TCTGGGCATG GGCGGTTTTG GCGCTTCGCG CGCACTGTCT ACCCGCAACG ATGAGCCAAG CCGGGCCAGC CGCCCATGGG ACAAGGGCCG TGACGGCTTT GTGTTGTCCG ACGGCGCTGG AGCCCTGGTG CTCGAGGAGC TGGAGCACGC CAAGGCCCGC GGGGCGACTA TCTATGCCGA GCTGGTTGGC TTTGGCATGA GCGGCGACGC CTACCACATG ACGTCGCCGC CTGACTCTGG CGAAGGCGCT GCCCGCTGCA TGGCCAACGC CTTGCGCGAT GCCGGTATCC AGCCGGAAGA CGTCAGCTAC ATCAACGCCC ACGGCACTTC TACCCCAGCG GGCGATGTGG CCGAAGTGGC GGCGATCAAG CGCGTGTTCG GCGAACATGC CTACAAGCTG GCGGTCAGCT CGACCAAGTC GATGACGGGC CACTTGCTGG GCGCCGCAGG CGCGGTGGAA GCGATCTTCA GCGTGCTGGC AATCAATAGC CAGATGGCCC CGCCGACCAT CAACCTGGAC GAGCCGGACG AAGGGTGTGA CCTCGACTTC GTTCCCCACC AGGCGCGCAG CATGCCGATC GACGTGGTGC TGTCCAACTC GTTCGGCTTT GGCGGCACCA ACGGCTCGCT GGTATTCCGC CGGTTTGCCG ACTGA
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Protein sequence | MSRRRVVVTG MGMLSPLGTD VPSTWQGILA GRSGIGPIEH TDLSAYSTRF GGSVKGFEVE QYLSAKEARK LDLFIQYGLA AGFQAVRNAG LEVTDANRER IGVAMGSGIG GLTNIEETSR TLHDSGPRRI SPFFVPGSII NMISGFLSIH LGLQGPNYAI ATACTTGTHC IGMAARNIAY GEADVMIAGG AEMAACGLGM GGFGASRALS TRNDEPSRAS RPWDKGRDGF VLSDGAGALV LEELEHAKAR GATIYAELVG FGMSGDAYHM TSPPDSGEGA ARCMANALRD AGIQPEDVSY INAHGTSTPA GDVAEVAAIK RVFGEHAYKL AVSSTKSMTG HLLGAAGAVE AIFSVLAINS QMAPPTINLD EPDEGCDLDF VPHQARSMPI DVVLSNSFGF GGTNGSLVFR RFAD
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