| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3794 |
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| Symbol | |
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| ID | 5195353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4257085 |
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| End bp | 4258071 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588261 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001269102 |
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| Protein GI | 148549000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.425215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.36128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAGG CCTACCCTTG GCAGCAGGCG CTGTGGCAGC AACTGGCCGG TCGCAGCCGC
CACGCCCACG CTTATCTGCT GCATGGGCCG CAGGGTATTG GCAAGCGGGC CATGGCCGAG
CGCCTGATGG CGCGCCTGTT GTGCCAGCAG CCGCAGGGCC TGGACGCTTG TGGGGCGTGT
AAGTCGTGCC TGTTGCTCAA GGCCGGCAGC CACCCGGACA ACTTCGTCCT CGAGCCGGAG
GAGGCTGACA AGCCGATCAA GGTCGACCAG GTACGGGAGC TGGTGGCCTT TGTGGTGCAG
ACCGCGCAGT TGGGCGGGCG CAAGGTGGTG TTGATCGAGC CAGTGGAGGC GATGAATGTA
AACGCCTCCA ACGCCCTGCT CAAAAGCCTT GAAGAACCTT CCGGTGACAC CGTGTTGTTG
CTGGTGACGC ACCAGCCCAG CCGTCTGTTG CCGACGATCA AGAGCCGCTG CCAGCAGGTG
GCCTGCCCGC AGCCCAGCCT GGCCCAGAGC CAGGCATGGC TGGCTGGCGC GTTACCCGAC
TGCGACGAGG TCGAGCGCGA TGAGCTGCTG ACGCTGGCAG CGGGCTCGCC ATTGATGGCG
GTCAGCCTGC AGGCGCAGGG TGTGCGCGAG CAACGCGCGC TGGTGGCCGA TGGGGTGAAG
AAGCTGCTCA AGCAGCAGCA ATCGCCCAGC CAGCTGGCCG ATGCCTGGAG CGGTGTGCCG
TTGTTGCTGC TGTTCGACTG GTTCTGCGAT TGGTCGCACC TGATCCTACG CTATCAGTTG
ACCCAGGACG AGGAAGGGTT AGGCTTGGCC GATATGCGCA AGGTCGTGCA ATACCTGGCG
CAGAAGAGCC GCCAGGCCAA GGTGCTGGAA GTGCAGGCCT GGATCCTCGA GCAGCGCCAG
AAGGTGCTGG GCAAGGCCAA CCTCAACCGT GCCTTGTTGC TTGAATCGCT GCTGGCTCAC
TGGCTGCAAC TGCCGGGTGC CCGCTGA
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| Protein sequence | MAEAYPWQQA LWQQLAGRSR HAHAYLLHGP QGIGKRAMAE RLMARLLCQQ PQGLDACGAC
KSCLLLKAGS HPDNFVLEPE EADKPIKVDQ VRELVAFVVQ TAQLGGRKVV LIEPVEAMNV
NASNALLKSL EEPSGDTVLL LVTHQPSRLL PTIKSRCQQV ACPQPSLAQS QAWLAGALPD
CDEVERDELL TLAAGSPLMA VSLQAQGVRE QRALVADGVK KLLKQQQSPS QLADAWSGVP
LLLLFDWFCD WSHLILRYQL TQDEEGLGLA DMRKVVQYLA QKSRQAKVLE VQAWILEQRQ
KVLGKANLNR ALLLESLLAH WLQLPGAR
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