| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3774 |
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| Symbol | |
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| ID | 5194040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4231958 |
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| End bp | 4233391 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588234 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001269082 |
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| Protein GI | 148548980 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA AAACGCTCTA CGACAAACTC TGGGAAGCCC ATGAGGTCAA GCGCCGTGAT
GACGGCTCGT CCTTGATCTA CATCGACCGC CACATCATCC ACGAAGTGAC GTCGCCCCAG
GCCTTCGAAG GCCTGCGCCT GGCCAATCGC AAACCGTGGC GTATCGACGC CAACATCGCC
ACGCCGGACC ACAACGTGCC GACCACGCCA GAGCGCAAGG GCGGTATCGA GGCGATCGTC
GACCAGGTTT CGCGCCTGCA GGTGCAGACC CTCGACGAGA ACTGTGACGA ATACGGCATC
GTCGAATTCA AGATGAATGA CGAGCGCCAG GGCATCGTCC ACGTCATCAG CCCGGAGCAG
GGCGCCACCT TGCCGGGCAT GACCGTGGTC TGCGGTGACT CGCACACCTC CACCCACGGC
GCTTTCGGTG CCCTGGCCCA CGGCATCGGC ACCTCCGAGG TCGAGCACGT GCTCGCCACC
CAGTGCCTGG TCGCCAAGAA GATGAAGAAC ATGCTGGTGC GCGTGGAAGG CCAATTGCCG
GCCGGCGTCA CCGCCAAGGA TATTGTCCTG GCCGTGATCG GCAAGATCGG CACTGCCGGT
GGCAACGGTC ACGCCATGGA GTTCGCTGGC AGTGCCATTC GCGAATTGTC GATGGAAGGC
CGCATGACCA TCTGCAACAT GTCCATCGAA GCCGGTGCCC GCGTTGGCTT GGTGGCGACC
GATGCCACTA CCGTTGCCTA CGTCGAAGGG CGCCCGTACG CGCCGAAGGG CGAGCAGTGG
AAGCAAGCGG TCGAATCGTG GAAAGACCTG GTGTCGGATG ACGATGCCGT ATTCGACACC
GTGGTCGAGC TGGATGCCAG CCAGATCAAG CCACAGGTCA GCTGGGGCAC TTCGCCCGAG
ATGGTTCTGG CCGTCGACCA GCGCGTACCG GATCCGGCGG CCGAAGCCGA CCTGGTCAAG
CGTGGTTCGA TCGAGCGTGC CTTGAAGTAC ATGGGGCTGA CCGCCAACCA GGCGATCACC
GACATCAAGT TGGACCGTGT GTTCATCGGC TCGTGCACCA ACTCGCGAAT CGAGGACCTG
CGCGCTGCGG CGGAAATCGC CAAGGGTCGC AAGGTGGCCG CCAGCGTCAA GCAAGCCATC
GTCGTGCCGG GTTCGGGTCT GGTCAAGGCC CAGGCCGAGC GTGAAGGCCT GGACAAGATC
TTCCTCGAAG CCGGTTTCGA ATGGCGTGAA CCAGGCTGCT CGATGTGCCT GGCGATGAAC
CCGGACCGCC TGGAAAGCGG CGAGCATTGC GCGTCCACCT CCAACCGCAA CTTCGAAGGC
CGTCAGGGCG CCGGTGGCCG TACCCACCTG GTCAGTCCGG CCATGGCCGC CGCTGCCGCG
GTAGCCGGCC ACTTCATCGA TGTCCGCGAG TTGATCCAAG GGAGCGCAGC ATGA
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| Protein sequence | MAGKTLYDKL WEAHEVKRRD DGSSLIYIDR HIIHEVTSPQ AFEGLRLANR KPWRIDANIA
TPDHNVPTTP ERKGGIEAIV DQVSRLQVQT LDENCDEYGI VEFKMNDERQ GIVHVISPEQ
GATLPGMTVV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QCLVAKKMKN MLVRVEGQLP
AGVTAKDIVL AVIGKIGTAG GNGHAMEFAG SAIRELSMEG RMTICNMSIE AGARVGLVAT
DATTVAYVEG RPYAPKGEQW KQAVESWKDL VSDDDAVFDT VVELDASQIK PQVSWGTSPE
MVLAVDQRVP DPAAEADLVK RGSIERALKY MGLTANQAIT DIKLDRVFIG SCTNSRIEDL
RAAAEIAKGR KVAASVKQAI VVPGSGLVKA QAEREGLDKI FLEAGFEWRE PGCSMCLAMN
PDRLESGEHC ASTSNRNFEG RQGAGGRTHL VSPAMAAAAA VAGHFIDVRE LIQGSAA
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