| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3761 |
|---|
| Symbol | |
|---|
| ID | 5192764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4216180 |
|---|
| End bp | 4217685 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588221 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_001269069 |
|---|
| Protein GI | 148548967 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCA TCGTCGGTAT CGTCGGTAAG TCGAACGTCA ATCAGGCGCT GTATGACGCG
CTTACGGTCC TCCAGCACCG CGGCCAGGAC GCTGCCGGTA TCGTGACCAG CCATGACGGC
CGGTTGTTCC TGCGCAAGGA TAATGGCCTG GTGCGCGACG TGTTCCAGCA GCGCCACATG
CAGCGCCTGG TAGGCAACAT CGGCATCGGC CACGTGCGCT ACCCGACTGC GGGCAGCTCG
ACCTCGGCCG AGGCCCAGCC GTTCTACGTC AATTCGCCTT ACGGCATCAC TCTGGCTCAC
AACGGCAACC TGACCAACGT CGAGCAGTTG GCCAAGGAGA TCTACGAGTC CGATCTGCGC
CACGTCAACA CCAACTCCGA CTCGGAAGTG CTGCTGAACG TGTTCGCCCA TGAGCTGGCG
GTGCGCGGCA AGTTGCAGCC GACCGAAGAA GACGTGTTCG CTGCGGTCTC CCATGTGCAC
AGCCGCTGCG TTGGCGGTTA CGCCGTCGTG GCCATGATCA CCGGCTACGG CATCGTCGGC
TTCCGCGACC CCCATGGCAT TCGCCCGGTG GTGTTCGGTC AGCGTCACAC CGACGAAGGT
GTGGAATACA TGATCGCCTC GGAAAGCGTC GCCCTGGACG TGCTCGGCTT CACCCTGATC
CGCGACCTGG CACCGGGCGA AGCGGTGTAC ATCACCGAAG AAGGCCAGCT GTTCACCAAG
CAATGTGCCG AAGCGCCGAA GCTGCAGCCG TGCATCTTCG AGCACGTCTA CCTGGCGCGG
CCGGACTCGA TCATCGATGG GGTCTCGGTG TACAAGGCGC GTCTGCGCAT GGGTGAAAAG
CTGGCCGACA AGATCATGCG CGAACGCCCC GATCATGATA TCGACGTGGT CATCCCGATC
CCGGATACCA GTCGCACTGC CGCGCTGGAA CTGGCCAACC GGCTGGGCGT CAAGTTCCGC
GAAGGTTTTG TCAAGAACCG TTACATCGGC CGTACCTTCA TCATGCCCGG CCAGGCCGCG
CGCAAGAAGT CGGTGCGTCA GAAGCTCAAC GCCATCGAGC TGGAGTTCCG CGGCAAGAAT
GTGATGCTGG TGGACGACTC GATCGTGCGC GGCACCACCT GCAAGCAGAT CATCCAGATG
GCCCGCGAAG CCGGCGCCAA GAATGTCTAC TTCTGCTCCG CGGCCCCTGC AGTACGCTAC
CCCAACGTCT ACGGCATCGA CATGCCGAGT GTTCACGAAC TGATCGCCCA CAACCGCACC
ACCGAACAGG TGGGTGAGTT GATTGGCGCC GATTGGCTGG TCTATCAGGA CCTGCCAGAC
CTGATCGATT CGGTCGGCGG CGGCAAGATC AAGATCGAGC AGTTCGATTG CGCGGTGTTC
AACGGCGAAT ACGTCACTGG CGATATCGAC GAAGCCTACC TCGACCGCAT CGAGCAGGCC
CGTAATGACC TGGCCAAGGT CAAGAACCAG GCCGTCAGCG CGATCATCGA CCTTTACAAC
AACTGA
|
|---|
| Protein sequence | MCGIVGIVGK SNVNQALYDA LTVLQHRGQD AAGIVTSHDG RLFLRKDNGL VRDVFQQRHM
QRLVGNIGIG HVRYPTAGSS TSAEAQPFYV NSPYGITLAH NGNLTNVEQL AKEIYESDLR
HVNTNSDSEV LLNVFAHELA VRGKLQPTEE DVFAAVSHVH SRCVGGYAVV AMITGYGIVG
FRDPHGIRPV VFGQRHTDEG VEYMIASESV ALDVLGFTLI RDLAPGEAVY ITEEGQLFTK
QCAEAPKLQP CIFEHVYLAR PDSIIDGVSV YKARLRMGEK LADKIMRERP DHDIDVVIPI
PDTSRTAALE LANRLGVKFR EGFVKNRYIG RTFIMPGQAA RKKSVRQKLN AIELEFRGKN
VMLVDDSIVR GTTCKQIIQM AREAGAKNVY FCSAAPAVRY PNVYGIDMPS VHELIAHNRT
TEQVGELIGA DWLVYQDLPD LIDSVGGGKI KIEQFDCAVF NGEYVTGDID EAYLDRIEQA
RNDLAKVKNQ AVSAIIDLYN N
|
|---|
| |