| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3757 |
|---|
| Symbol | |
|---|
| ID | 5190312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4210977 |
|---|
| End bp | 4212035 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640588213 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001269065 |
|---|
| Protein GI | 148548963 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.322144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGCT GTAAGCCCAT GGCCCGCCCC CGCGTGCGCC TGGGCGAACT GTCGGTGGGT
TTTGTCCAGC CTTTGAGCGA AGCCCTGCGC GAGCTGGGCC ACGACCCTGA ACCATTGCTG
CGCCGCTACG GCCTGGACGC GACACGCCTG GGCGAAGCCG GCGCACGCCT GTCCATCCCC
CGCTACATGC ATCTGGGCCA CGCAGCAATC GAAATGAGCG GCGAGGCTGC TCTAGGCCTG
CGTATGGGGC GCCTGAGCCG TCTGGCGCAT GCTGGCCTGG CCGGGGTCAC CGCGGCCCAG
GCCCCCACCT TGGGTGAGGC GGCGCGCACC CTGCTGCGCT TCGAGCCGCT TTACGCGGCC
AACTACCGTG GCCATTCCCG CTTTGTGGAA GATGCCCAGG GCGCCTGGCT GCGCTTCTAC
TCCATCAGCC CGTATAACGA CTACAACCGC TTTGTGGTCG ACTCACTGTT GGCCGGCTGG
CTGGCCCAGT TGACCGACCT TGCCGGCACC CCAGTGCAGG CTGAACGCCT GGAGATCGAG
TTTGCCGCGC CCTCCTATGC CGCCCGCTAC CAAACGCTCT GCAGCACGCC TGTGCAATTC
GCCGCCGACG GCAATCAGCT GCGTCTGAGC CGCGCCACCT TGCAACTGGC CAACCCAGCG
CATTGCCCAA GTACCTGGCA GCACCTGTTG CAGTTGTGCG AAGCAGAGCT GCTGCAGCGC
ACGCGAGTGC GTAGCCTGGG TGAGCGCATT ACTCACCTGC TGGGCCCGCT GCTCAATGGC
GGCCGTGAAC CGGACCTGGA GGAAGTGGCG CTGCACTTGC AACTGCCAAG CTGGACCTTG
CGCCGCAAGC TCGCCGAAGA AGGCACGCGT TTTCGCGACT TGCTCAACGA AACACGGCGC
GACCTGGCCG AGACCTACAT CCGTGATACG GAACTGGCCT TTGGCGAGAT AGCCTATCTG
TTGGGGTTTG CTTCGGCCGA GGCCTTCCAG CGCGCATTCA AGCGCTGGAC GGGCCTCACG
CCGGGGGCGT TCCGCCGCAG CCAGCGGCAG CCGGGCTAG
|
|---|
| Protein sequence | MCGCKPMARP RVRLGELSVG FVQPLSEALR ELGHDPEPLL RRYGLDATRL GEAGARLSIP
RYMHLGHAAI EMSGEAALGL RMGRLSRLAH AGLAGVTAAQ APTLGEAART LLRFEPLYAA
NYRGHSRFVE DAQGAWLRFY SISPYNDYNR FVVDSLLAGW LAQLTDLAGT PVQAERLEIE
FAAPSYAARY QTLCSTPVQF AADGNQLRLS RATLQLANPA HCPSTWQHLL QLCEAELLQR
TRVRSLGERI THLLGPLLNG GREPDLEEVA LHLQLPSWTL RRKLAEEGTR FRDLLNETRR
DLAETYIRDT ELAFGEIAYL LGFASAEAFQ RAFKRWTGLT PGAFRRSQRQ PG
|
|---|
| |