Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3755 |
Symbol | |
ID | 5191246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4207144 |
End bp | 4209699 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588211 |
Product | fimbrial biogenesis outer membrane usher protein |
Protein accession | YP_001269063 |
Protein GI | 148548961 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTGT CCATCGCCCC CCACCCCGTC GAGGGAGCCG ATGCAGGCGC GCACGCGTTC AGTGGCGGCA CGCTTCGTCC GGCCTGGAAG CTCAACGCCC TGTCATTGGT CATCTGCACC GCGCTGCCCA GCCTTGCATC GGCGCAGGAC GCCGCCCACC TGCAGGGCTT CAACACCACC TTTCTGCAGG GCGCGCAATC GGCGGTCGAC CTGCAAATGC TGCTGTCGGC CAACAGCGTG CTGCCGGGCA ACTACCGGGT AGACCTGTAC AGCAACGAAG TGCTGGTAGG CCGGCGTGAC ATCGAATTCA ACCGCCACCC ACAGACTGGG CGGGTGGAAC CCTGCCTGAC CCTGGAACTG CTCGAGCAGC TGGGTATCGA CATGGACAAG CTCAAGGCAC AGGGGCGCCT GGATACCGCC TCGGCCTGCC ACGACCTGGC CGCACTGATC GACCAGGCCA GCCTGAGCTA CGACTCGGGT CACCTGCGCC TGTCCGCCAG CATCCCGCAG GTTGCCATGA AACGCGGCCT GCGCGGCTAC GTCGACCCGC AACTGTGGGA CGCAGGGGTG TCTGCGGCGT TCGTGAACTA TCAGTTCAAC ACCAGCCGCA GCGCCGGCGA TGCCGAGACC CGCATCGCCA ACAACCTGAG CCTGCGCAAC GGCATCAACC TGGGCAGTTG GCGCTTGCGC AACGAGTCGA ACTTCAGCAG CGGCACCGGG CAGCCGGACA CCTTCAAGAG CAACCGCAGC TATGTGCAGC ACGACGTGAC CGCGCTCAAA GGCCAGTTCA GCGCCGGTGA CATTTTCAGC GACACCGACC TGTTCGACAG CGTGCGCTAC CGCGGCCTGA AGCTGGCTTC GGACGAAGGC ATGCGCGCCG ACAGCGAGCG CGGCTACGCA CCTGTGGTGC GTGGCGTGGC GCAGACCAGC GCCAGGGTCG AGATTCGCCA GAACAACTAC GTGCTCTACA CCGCCAACGT ACCGCCCGGC CCGTTCGAGA TCAGCGACAT CTACCCCAGC GGCTCCAATG GCGACCTGGA AGTCACCATC ATCGAGGCCG ACGGCCGTCG ACGGGTCACC GTGCAGGCCT TCTCCAGCCT GCCGCTCATG GTCCGTGGCG GTCAGGTCAA GTACAGCCTG TCCGCTGGAC GCTACAACAG CAACACGGAG GGCCTGGCCA CGCCGCAGAT GCTCAGTACG ACGCTGGCTT ACGGCCTGAC CAACACCGTG ACGGGCGTCT TTGGCCTGCA AGCCACCCAA GACTATAAGG CAATGGCCGT GGGCAGCGGC CTGAACACAC TGCTGGGCGC CTTTTCGCTC GATGTCACCC ACTCCTCGAG CAAGGCCCAG GGCCAGACCA CCCAGGGCAA CAGCTTGCGG GCGCTATACG CCAAGACATT CACCGGCACC GACACCAACT TTACCCTGGC CGCCTACCGC TATTCCACCG AGGGCTTCCG TACCCTCACC CAGCATGTCG AGGACCTAAG CGCCAGCGCG ATCAAGCGCA GTGGCAACTC CAAGACCCGC ACCGACCTGA CCATCAACCA GAGCCTGGGC CGCAACCGCG CGTTCGGCAG CCTGTATCTG ACCGCCACCG ACCAGCGCTA CTGGAACCGC GGCGGTTCGC AGAGCCTGAC CGCCGGATAC AGCAACAACT GGGGCGAGAT CTCCTACAAC CTGGACGTCA GCCGCACCAA GGAGCTGGGG AACTCAGGCC CTTCGGGGCA AGATACCCAG CTCAACCTGT CGGTATCGTT CCCACTCGGC AGCCGCGCCC GCGCACCGCG GGCGTTCGTC ACCACCAGCA CACAGAAGGG CAACGACACC ACCCAGGCCG GCATCAACGG CTACCTGTCG GAGACCAGCG ACACCTTCTA CTCGATCCAG GGCGGCCACA GCCGCACCAG CGGCAGCTCG GCATCGGCCA ACCTGAACAC CCGCACTTCG GTGGCCGACA TCAGCCTGGG CTATAGCCAG GGGCGCGGCT ACGACTCGCA GAACCTGAAC ATTGCCGGCG CCGTGGTTGC CCACCAGGGC GGCATCAACC TCGGCCAGTC GCTCAGTGAG ACCTTCGCCC TGGCCGAAGT GCCGGGTGTG AAGGGCGCAA AGATCAGCAG CTATAGCGGT GTGGAGACCG GGCGCAATGG CTATGCGGTG ATCCCCAGCG CCCAGCCCTA TCGCGTCAAC TGGATCAGCC TGGACACCAG TGACCTGGGG GGCGACATCG AAATCGACAA TGCCACCCAG CAGTTGGTGC CTCGCCGCGG TGCCGTGGTG CTTGCCCGCT ATACCGGCAA GAGCGGGCGT CGGGTGCAGT TCGAGCTGTT CGACGAGCGC GGTCAACTGA TACCGTTCGG GGCCTCGGTC GAGGACGCTG CGGGCCAGCA ACTGGCAATT TCCGACCCGA GCGGCAAGGC ATTGTTACTC CTGGAACAGG ACCAGGGCAG CCTGACCATC AAGTGGGGTG AGCGCCAGTG TTCGGCACCT TACAACCTTC CGGAACGGGA CAAGGCAGTT AACTATGAAC GTCAGCGCCT GGCTTGCCGG CCGTGA
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Protein sequence | MSLSIAPHPV EGADAGAHAF SGGTLRPAWK LNALSLVICT ALPSLASAQD AAHLQGFNTT FLQGAQSAVD LQMLLSANSV LPGNYRVDLY SNEVLVGRRD IEFNRHPQTG RVEPCLTLEL LEQLGIDMDK LKAQGRLDTA SACHDLAALI DQASLSYDSG HLRLSASIPQ VAMKRGLRGY VDPQLWDAGV SAAFVNYQFN TSRSAGDAET RIANNLSLRN GINLGSWRLR NESNFSSGTG QPDTFKSNRS YVQHDVTALK GQFSAGDIFS DTDLFDSVRY RGLKLASDEG MRADSERGYA PVVRGVAQTS ARVEIRQNNY VLYTANVPPG PFEISDIYPS GSNGDLEVTI IEADGRRRVT VQAFSSLPLM VRGGQVKYSL SAGRYNSNTE GLATPQMLST TLAYGLTNTV TGVFGLQATQ DYKAMAVGSG LNTLLGAFSL DVTHSSSKAQ GQTTQGNSLR ALYAKTFTGT DTNFTLAAYR YSTEGFRTLT QHVEDLSASA IKRSGNSKTR TDLTINQSLG RNRAFGSLYL TATDQRYWNR GGSQSLTAGY SNNWGEISYN LDVSRTKELG NSGPSGQDTQ LNLSVSFPLG SRARAPRAFV TTSTQKGNDT TQAGINGYLS ETSDTFYSIQ GGHSRTSGSS ASANLNTRTS VADISLGYSQ GRGYDSQNLN IAGAVVAHQG GINLGQSLSE TFALAEVPGV KGAKISSYSG VETGRNGYAV IPSAQPYRVN WISLDTSDLG GDIEIDNATQ QLVPRRGAVV LARYTGKSGR RVQFELFDER GQLIPFGASV EDAAGQQLAI SDPSGKALLL LEQDQGSLTI KWGERQCSAP YNLPERDKAV NYERQRLACR P
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