Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3718 |
Symbol | |
ID | 5190229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4164746 |
End bp | 4168390 |
Gene Length | 3645 bp |
Protein Length | 1214 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588174 |
Product | SMC domain-containing protein |
Protein accession | YP_001269026 |
Protein GI | 148548924 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTC TCGCCATCCG CCTGAAGAAC CTGGCATCGC TGGCCGGCCC GATCGACATC GATTTCACCG CAGAACCGTT GGCCAGCGCT GGCCTGTTCG CTATCACCGG GCCTACCGGT GCTGGCAAGA GCACCTTGCT TGACGCCCTG TGCCTGGCGC TGTTCGGCAC CGTGCCGCGC CTCAATGCCA TTGGCCGTGA GGCCAAGGTG CCGGACGCCG ACGGCGACAT CCCCACCTCC GACCCGCGCA ACCTGCTGCG CCGTGGCACC GGCAGCGGGT TTGCCGAGGT CGATTTCGTC GGCATCGACG GCCGCCGCTA CCGCGCCCGC TGGGAAGCCA ACCGCGCCCG CGACAAGGCC AACGGCAAAC TGCAGCACAG CCGTCAAAGC TTCTACGACC TCGACAGCGA GCAAGTGCTC GGCAGTGGCA AGAACGAATA CAAGCAACTG GTCGAAGCCC GTTTGGGCCT GAACTTCGAA CAGTTCACCC GTGCGGTGAT GCTGGCCCAG AGCGAGTTCG GCGCGTTCCT CAAGGCCGAC GACAAAGACC GCAGCGAGTT GCTGGAAAAG CTCACCAACA CCGCGATCTA CACCCGCCTG GGCCAGCGTG CCTTCAGCAA GGCGCGCGAA GCCGGCGAGG CGCACAACAC CCTGAAAGAG CGCGCCAGCC ACCTGCTGCC GATGGCTGCC GAGGCCCGTG CCGAGCTCGA CAAGCGCCTG GAGCAGGCGC AGCAGCAGTT CAAGGCCGAC CAGGCCGGCG AGCGCCAGCT GGAGCAGCAA CGCAACTGGC TGAATGAACA ATGCCAGCTA CAGGCCCAAC ACACCGAAGC CAGCACCACG CTGCAGGCCG CCGAACTGGA CTGGCAACAG CTGGCCGAAC CACGCCTGGA CCTGGCACGC CTGGAGCGCC TGGCCCCACA GCGTCACCAG TTCCACCGCC GACAGGCCCT GAGCGCACAG CTGGCGCCAG TGGCCGCGAA AATGGCCGAA CAGCAACAGC AGCAAGCCGA ACTGCAGGTG CGCACCCGCG AGCTCGAACA GGCGCTGGAC ACTGCGCGCC AAGCGCTTGC GGACCGCCAG GCCCAGCACA GCGAGAACGC GCCGCGCCTG CGCCAGGCCT TTGCCGCCCA GGACAGTCTG GCACGCCTGG ACCAGGAGCT GGCCGCCCAG CGCAGCATCA GCCAACAGGC CCAACAACAG GTCGCTGACG GCCAGCAGCA ACTGCAGCAG CTGGAAGACA ACCAGCAGCG CAGCGTGCAG CAACTGGCGC AGATCGACAC CGCGCTTGCC GACAGCCAGC ACCTGGCGGG CCTGGCCAAT GCCTGGCACG CCTACCTGCC GCAACTGAAA CAGGTGATGC TGATCGGTGG CCGCCTGACC AAGGGCCGAG AAGAGCTACC CGGCTTGCAG GCCCAGGCCA GCCAGGCCAA TGCGCACCTG CAGGCCGAGC GCGATGCCTA CGACCTGTTG TTCCGTGAAG CCAAGGCCGA ACCCCAGGCC CTGGCCGAAC AGATCGACCT GCTCGGCGGC ATGCTGCAGG ACAACCGCAA ACAGCAGCGC GCCGTAGAAG AAATGTCACG CCTGCACGGC CGTGAACAGG AGCTGCGCCA GCAGCTGGAT GCCCTGCGCG AACGGCAGCA GCAGGCCATG CTGCAACGCC AGCAACTGAT TACCGAAGGC ACCGCCGCCA AGGCCGAGCT GGAGGCCGCC GAGCAGGCGT TGATCCTCAC CCGTCAACTG CTGGAACGGC AACGCCTGGC ACGCAACACC AGCGTCGAAG AACTGCGTGA CCAACTGCGT GACGGCGAAC CCTGCCCGGT CTGTGGCAGC GCCGAACACC CCTTCCATCA GCCAGAAGCG CTGCTGCAGA GCTTGGGTCG CCATGACCAG GCCGAAGAGC ACGCCGCGCA GAAGCAGGTC GAAACGCTCA ACAACACGCT GGTGGAGCTG CGTACCCAGC TGGGTGTGGT CAATGCCCAG CTCAAGGACT TCCAGCAGCA ACAGCAGCAA CTGGGCGAAC AGTTGCAACC GCTGGTGGCT CAGGTACAGG CACACAGCCT ATGGCCAGCC CTCGCCCCGC AGGACGACAA GGCCCGTAGC ACCTGGCTCG ACAGCCAGCT GCGTCGCCTG GATGAAGAAA TCAGCCAGGA CGAGAAACGC CAGAGCGCCC TGCTGGCCCT GCAAAAAGAC GCCGCCCGCC TGAACCAGCA ATTGCAGGCG GCCCACGACG CCCAGCAACA GGCCCAACGC CATCTGGAGC AACAGCACCA AGCCCTGGCC AACGACGAAC AGCTGTTGCA GCAAGGCCTG AACGACCTGG CCGGCGTACT GCCAGAGGAA GCGCTCAAGG CCCTCAACGA CGACCCGGCC AATGCCTTCC TCGCCCTCGA CCAGCAGATT GCCCAGCGCC TGCAGCAACT GGAACAGCGC AAGGACGAAC AGGAAGAACA GCAAGCCCGG CAAGCCCAGC TGGACAAACT GCGCGATCAG CAACAGGCGC GCGTGCAAGG CCTGCAACAG TTGCAACACA CGCTCGCGGC CCTCGACGAA CAGCGCCAGC AGGCCCAGAC GTCGCTCGGC GAGCTGCTAG GCGAACATGC CAGTGCCGAA GCCTGCCAGC AGCATATGGA AGCCACGCTG GAACAAGCCC GCGCCCTCGA TGCCGACACC GCCCAGCGCC TGCAAGATCT GCGCACCCAA GGCGTGCAAC TGGCCAGCGA GCTCAAGGCC AATACCCAGC AACAACAGGC ACTGGATGCC GAATGCCAAC AGTTGCAGGC CCAGATCGCC CAGTGGCGCA GCGAGCATCC GGAACTGGAC GATGCCGGCC TCGATCGCCT GCTGGCCATG GATGACGCGC AAGTCAATGA ATTGCGCCAG CGTTTGCAAG GCGCGGAAAA AGCCATCGAG CAGGGCCGCG TGCTGCTGCA GGAACGTGAG CAGCGCCTGC AACAACACGC CGCACAAATG ACCGTGGACA CCTCGGCCGA AGCCTTGGAA CACGCCCTGA CCGAGCTGCG CGGGCGGCTG GTCAACCATG AGCAGCAGTG CGCCGAATTG CGTGCACAAC AGGCCGACGA TCAGCGCCGC CAGCAGGCCC ACCAGGCGCT GGCGGCAGAA ATCGAACAGG CCCACCAGCA GTGGCAACGC TGGGCCCGCC TCAATGCCCT GATCGGTTCG GCCTCCGGTG ATGTGTTCCG CAAGATCGCC CAAGGCTACA ACCTTGATCT GCTGCTGCAC CACGCCAACG CCCAGCTACG TCAGCTGGCC CGTCGCTACC GCCTCAAGCG CGGCGGCAGC GCCCTTGGCC TGCTGGTGCT GGACACCGAG ATGGGCGACG AACTGCGTTC GGTGCACTCG TTGTCGGGCG GGGAAACCTT CCTGGTGTCG CTGGCCCTGG CGCTGGGCCT GGCGTCGATG GCGTCCAGCA CCTTGCGTAT CGAGTCGCTG TTCATCGACG AAGGCTTCGG CAGCCTCGAC CCCGAGTCGC TGCAACTGGC AATGGACGCC CTCGACGGCT TGCAAGCCCA GGGCCGCAAA GTGGCGGTGA TTTCCCACGT ACAGGAAATG CACGAGCGCA TCCCGGTGCA GATCCAGGTG CGGCGCCAGG GTAATGGCCT CAGTGACGTG GAGGTGTGCG GGTGA
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Protein sequence | MKILAIRLKN LASLAGPIDI DFTAEPLASA GLFAITGPTG AGKSTLLDAL CLALFGTVPR LNAIGREAKV PDADGDIPTS DPRNLLRRGT GSGFAEVDFV GIDGRRYRAR WEANRARDKA NGKLQHSRQS FYDLDSEQVL GSGKNEYKQL VEARLGLNFE QFTRAVMLAQ SEFGAFLKAD DKDRSELLEK LTNTAIYTRL GQRAFSKARE AGEAHNTLKE RASHLLPMAA EARAELDKRL EQAQQQFKAD QAGERQLEQQ RNWLNEQCQL QAQHTEASTT LQAAELDWQQ LAEPRLDLAR LERLAPQRHQ FHRRQALSAQ LAPVAAKMAE QQQQQAELQV RTRELEQALD TARQALADRQ AQHSENAPRL RQAFAAQDSL ARLDQELAAQ RSISQQAQQQ VADGQQQLQQ LEDNQQRSVQ QLAQIDTALA DSQHLAGLAN AWHAYLPQLK QVMLIGGRLT KGREELPGLQ AQASQANAHL QAERDAYDLL FREAKAEPQA LAEQIDLLGG MLQDNRKQQR AVEEMSRLHG REQELRQQLD ALRERQQQAM LQRQQLITEG TAAKAELEAA EQALILTRQL LERQRLARNT SVEELRDQLR DGEPCPVCGS AEHPFHQPEA LLQSLGRHDQ AEEHAAQKQV ETLNNTLVEL RTQLGVVNAQ LKDFQQQQQQ LGEQLQPLVA QVQAHSLWPA LAPQDDKARS TWLDSQLRRL DEEISQDEKR QSALLALQKD AARLNQQLQA AHDAQQQAQR HLEQQHQALA NDEQLLQQGL NDLAGVLPEE ALKALNDDPA NAFLALDQQI AQRLQQLEQR KDEQEEQQAR QAQLDKLRDQ QQARVQGLQQ LQHTLAALDE QRQQAQTSLG ELLGEHASAE ACQQHMEATL EQARALDADT AQRLQDLRTQ GVQLASELKA NTQQQQALDA ECQQLQAQIA QWRSEHPELD DAGLDRLLAM DDAQVNELRQ RLQGAEKAIE QGRVLLQERE QRLQQHAAQM TVDTSAEALE HALTELRGRL VNHEQQCAEL RAQQADDQRR QQAHQALAAE IEQAHQQWQR WARLNALIGS ASGDVFRKIA QGYNLDLLLH HANAQLRQLA RRYRLKRGGS ALGLLVLDTE MGDELRSVHS LSGGETFLVS LALALGLASM ASSTLRIESL FIDEGFGSLD PESLQLAMDA LDGLQAQGRK VAVISHVQEM HERIPVQIQV RRQGNGLSDV EVCG
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