| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3686 |
|---|
| Symbol | |
|---|
| ID | 5192146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4126738 |
|---|
| End bp | 4127631 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588142 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001268994 |
|---|
| Protein GI | 148548892 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATG AGCTGCAAGA CATCAGATCT TTCGTGAAAA TCGCCGAACT TGGCAGTTTT
CATGAGGCCG CCGAAGCGCT TCACCTGTCC CAGCCGGCCC TGAGCCGGCG GATCAAGAAG
CTGGAGGAAG GCCTGGGCAC CTCCCTACTG GAACGCACCA CTCGCCGGGT CAGCCTGACC
AGCGTGGGCC GCGACTTCCT GCCCAAGGCC AGGCGCCTGC TGGATGATTT TGAAGACTCG
ATCCTCAGCA TCCGCGAACT GGCCGAGCGC CAGACCGGTC AGGTTACCCT CGCCTGCATC
CCTACCGCCG CGTTCTACTT CCTGCCGTCG GTGATCCGCG ATTACAACGA GCAATACCCG
AAAATCCGCA TTCGCCTGCT GGACCTTAGC GCCAACGACG GGCTCGAAGC CGTGCTGCGC
GGCGAGGCCG ACTTCGGCAT CAACATGATG AGCGGCCAGC ACCCGGACAT CGAGTTTGTC
TCGCTGGTGC AGGAGCACTT TGTACTCGCC TGCCGGCGTG ACCACCCACT GGCGAACCGC
GCCTCCGTTA CCTGGACAGA GCTGGCTGAT TACCGCCTGA TCGGCGTCGG CCGCCTGAGT
GGCAACCGCA TGCTGCTGGA CCATGCGTTG TCCGGGCTCA ACCTGCGGCC CAAGTGGTTC
TACGAAGTGC AACACCTGTC CACGTCGCTG GGCATGGTCG AGGCCGGGCT GGGCGTGTCC
GCCATGCCCA GCCTGGCCAT GCCCAATGCC GACCACCCCA CGCTGGTGAG CGTGCCGTTG
ATCGAGCCGC AAGTCACCCG CACGCTAGGG CTGGTGTACC GGCGCGGCGC ATCGCTGTCG
CCGGCTGCGG AAAAATTCGT TTCGATCCTG CTGCAGAAAT GGCCAAATCG CTGA
|
|---|
| Protein sequence | MEYELQDIRS FVKIAELGSF HEAAEALHLS QPALSRRIKK LEEGLGTSLL ERTTRRVSLT
SVGRDFLPKA RRLLDDFEDS ILSIRELAER QTGQVTLACI PTAAFYFLPS VIRDYNEQYP
KIRIRLLDLS ANDGLEAVLR GEADFGINMM SGQHPDIEFV SLVQEHFVLA CRRDHPLANR
ASVTWTELAD YRLIGVGRLS GNRMLLDHAL SGLNLRPKWF YEVQHLSTSL GMVEAGLGVS
AMPSLAMPNA DHPTLVSVPL IEPQVTRTLG LVYRRGASLS PAAEKFVSIL LQKWPNR
|
|---|
| |