Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3680 |
Symbol | |
ID | 5195211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4120493 |
End bp | 4120948 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588136 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001268988 |
Protein GI | 148548886 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGG ACAACACACG GATGCTCACA GTGGGTGAAG TGGCCAAGCG CAGCGGCGTG GCGGTGTCTG CGCTGCACTT CTACGAAACC AAGGGGCTAA TCGCCAGCGT CCGTACGGCA GGCAACCAGC GCCGCTATCC CTCGCTGGTG CTGCGTACCC TGGCGATCAT CAAAGTGGCC CAGCGCACGG GTATTGCGCT GGAGGAAATC AAACAGGCCT TCAGCCGTTA TGCCCCCAAC AGCAAGCTCA CGGCCGCGCA ATGGGGCGAG ATGTCCACGG CCTGGCGCGA AGACCTGAAT GCCCGCATTC GCACACTGGA AGCACTGCGC GACAGCCTCG ACAACTGCAT AGGCTGCGGT TGCCTGTCGC TGGAAGACTG CCCGCTGCGC AACCCCGAAG ATGTGCTGGG CAAGGAAGGA ACCGGGGCGC GGATCCTCGA AAAGAAGGCG CGCTAA
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Protein sequence | MAADNTRMLT VGEVAKRSGV AVSALHFYET KGLIASVRTA GNQRRYPSLV LRTLAIIKVA QRTGIALEEI KQAFSRYAPN SKLTAAQWGE MSTAWREDLN ARIRTLEALR DSLDNCIGCG CLSLEDCPLR NPEDVLGKEG TGARILEKKA R
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