Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3658 |
Symbol | |
ID | 5194912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4087213 |
End bp | 4089588 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588114 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_001268966 |
Protein GI | 148548864 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.417276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGTAGAGT ACGTAGTTTC CCTCGATAAG CTCGGCGTCC ATGATGTGGA GCATGTGGGG GGCAAGAACG CATCCCTGGG CGAGATGATC AGTAACCTCG CCGGTGCCGG CGTGTCGGTG CCGGGCGGCT TTGCCACTAC GGCTCAGGCG TACCGTGACT TTCTCGAGCA GAGTGGGCTG AACGACCGCA TTCACGCCGC GCTCGACGCG CTGGACGTTG ACGACATCAA TGCCCTGACC AAGACCGGCG CGCAGATTCG CCAGTGGGTC ATGGAAGCCG AATTCCCGCC ACGCCTGGAT TCGGAAATCC GTACGGCCTT CGCCGAAATG GCCGCCGGCA ACGACAACAT GGCCGTTGCC GTGCGTTCTT CCGCCACTGC CGAAGACCTG CCGGACGCCT CCTTCGCCGG CCAGCAGGAA ACCTTCCTCA ACATCCGTGG CGTCGACAAC GTGATCCGCG CGGCCAAGGA AGTGTTCGCC TCGCTGTTCA ACGACCGTGC CATCGCCTAC CGCGTGCACC AGGGCTTCGA CCACAAGCTG GTGGCTCTGT CTGCCGGCGT GCAGCGCATG GTCCGCTCGG AAACCGGCAC AGCCGGGGTG ATGTTCACCC TCGACACCGA GTCGGGCTTC CGCGACGTGG TGTTCATCAC CGGCGCCTAC GGCCTGGGCG AAACCGTGGT GCAGGGTGCA GTCAACCCTG ACGAATTCTA CGTGCACAAG AACACCCTGC AGGCCGGCCG CCCGGCCATC CTGCGCCGTA ACCTGGGCAG CAAGGCGATC AAGATGATCT ATGGCGAAGA AGCCAAGGCC GGCCGTTCGG TCAAGACCGT CGAAGTCGAC CGCGCCGAGC GCGCACGCTT CTGCCTGACC GATGCCGAGG TCAGCGAGCT GGCCAAGCAG GCCATGATCA TCGAGCAGCA CTACCAGCGC CCGATGGACA TCGAGTGGGC CAAGGACGGT GACGACGGCA AGTTGTACAT CGTCCAGGCC CGCCCGGAAA CGGTGAAGAG CCGTTCCAGC GCCAACGTCA TGGAACGCTA CCTGCTCAAA GAGAAAGGCA CCGTGCTGGT CGAAGGCCGT GCCATTGGCC AGCGTATCGG CGCCGGCAAG GTTCGCGTCA TCAACGACGT CTCGGAAATG GACAAGGTCC AGCCGGGCGA CGTACTGGTC TCCGACATGA CTGACCCTGA CTGGGAACCG GTGATGAAGC GCGCCAGTGC CATCGTCACC AACCGCGGTG GCCGTACCTG CCACGCGGCG ATCATCGCCC GTGAGCTGGG CATCCCGGCG GTTGTCGGTT GCGGCAACGC TACCCAGGTG CTGAAAGACG GCCAGGGCGT GACCGTTTCC TGTGCCGAAG GCGACACCGG CTTCATCTTC GAAGGTGAGC TGGGCTTCGA CATCAAGCAG AACTCGGTCG ATGCCATGCC GGAACTGCCG TTCAAGATCA TGATGAACGT CGGCAACCCG GACCGCGCCT TCGACTTCGC CCAGCTGCCC AACGCCGGTG TCGGTCTGGC ACGCCTGGAG TTCATCATCA ACCGCATGAT CGGCGTGCAC CCCAAGGCAC TGCTGAACTA CGCGGGCCTG CCTGCCGACC TGAAAGACAG CGTCGACAAG CGCATTGCCG GCTACAACGA CCCGGTCGGC TTCTATGTCG AGAAGCTGGT CGAGGGTATC AGCACCCTGG CGGCGGCCTT CTACCCGAAA AAGGTCATCG TGCGCCTGTC GGACTTCAAG TCCAACGAGT ACGCCAACCT GATCGGCGGC AAGCTGTACG AGCCGGAAGA AGAAAACCCG ATGCTGGGCT TCCGCGGTGC GTCGCGCTAC ATCAGCGAAT CGTTCCGTGA CTGCTTCGAG CTGGAATGCC GTGCGCTGAA GCGCGTGCGC AACGAGATGG GCCTGACCAA CGTCGAGATC ATGGTGCCGT TCGTGCGCAC CTTGGGCGAA GCCAGCCAGG TCGTCGACCT GCTCGCCGAA AACGGCCTGG CCCGCGGCGA CAACGGCCTG CGCGTGATCA TGATGTGCGA ACTGCCGTCC AACGCCATCC TCGCCGAAGA GTTCCTGGAA TACTTCGACG GCTTCTCGAT CGGCTCCAAC GACCTGACCC AGCTGACCCT GGGCCTGGAC CGTGACTCGG GCATCATCGC CCACCTGTTC GACGAGCGTA ACCCTGCGGT GAAGAAGCTG CTGGCCAACG CCATTGCCGC CTGCAACAAG GCTGGCAAGT ACATCGGCAT CTGCGGCCAA GGCCCATCGG ACCACCCGGA CCTGGCCAAG TGGCTGATGG AGCAGGGCAT CGAAAGCGTG TCGCTGAACC CGGACTCGGT ACTCGAGACC TGGTTCTTCC TGGCCGAAGG CCAAGGCGCG GCCTGA
|
Protein sequence | MVEYVVSLDK LGVHDVEHVG GKNASLGEMI SNLAGAGVSV PGGFATTAQA YRDFLEQSGL NDRIHAALDA LDVDDINALT KTGAQIRQWV MEAEFPPRLD SEIRTAFAEM AAGNDNMAVA VRSSATAEDL PDASFAGQQE TFLNIRGVDN VIRAAKEVFA SLFNDRAIAY RVHQGFDHKL VALSAGVQRM VRSETGTAGV MFTLDTESGF RDVVFITGAY GLGETVVQGA VNPDEFYVHK NTLQAGRPAI LRRNLGSKAI KMIYGEEAKA GRSVKTVEVD RAERARFCLT DAEVSELAKQ AMIIEQHYQR PMDIEWAKDG DDGKLYIVQA RPETVKSRSS ANVMERYLLK EKGTVLVEGR AIGQRIGAGK VRVINDVSEM DKVQPGDVLV SDMTDPDWEP VMKRASAIVT NRGGRTCHAA IIARELGIPA VVGCGNATQV LKDGQGVTVS CAEGDTGFIF EGELGFDIKQ NSVDAMPELP FKIMMNVGNP DRAFDFAQLP NAGVGLARLE FIINRMIGVH PKALLNYAGL PADLKDSVDK RIAGYNDPVG FYVEKLVEGI STLAAAFYPK KVIVRLSDFK SNEYANLIGG KLYEPEEENP MLGFRGASRY ISESFRDCFE LECRALKRVR NEMGLTNVEI MVPFVRTLGE ASQVVDLLAE NGLARGDNGL RVIMMCELPS NAILAEEFLE YFDGFSIGSN DLTQLTLGLD RDSGIIAHLF DERNPAVKKL LANAIAACNK AGKYIGICGQ GPSDHPDLAK WLMEQGIESV SLNPDSVLET WFFLAEGQGA A
|
| |