| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3648 |
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| Symbol | |
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| ID | 5192645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4077486 |
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| End bp | 4078697 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588104 |
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| Product | nitrite transporter |
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| Protein accession | YP_001268956 |
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| Protein GI | 148548854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.407059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCA GCTTCTGGAA ATCCGGGCAT GTGCCCACGC TGTTCGCCGC GTTTCTGTAC
TTCGACCTCA GCTTCATGGT CTGGTACCTG CTGGGCCCGT TGGCGGTGCA GATTGCTGCC
GACCTGCAAC TGAGCGCACA GCAACGGGGC CTGATGGTGG CCACGCCGAT CCTGGCCGGG
GCAATCCTGC GCTTTGCCAT GGGCGTTCTG GTCGACCGCC TGTCGCCCAA GACGGCTGGC
CTGATCGGCC AGGTGGTGGT CATCGTCGCC CTGGCCGCAG CCTGGTACCT TGGCGTGCAC
AGCTATGAAC AGGCCCTGCT GCTAGGCGTG TTCCTGGGCT TTGCCGGTGC GTCATTCGCC
GTCTCGCTGC CGCTGGCCTC ACAGTGGTAC CCGCCACAGC ACCAGGGCAA GGCCATGGGC
ATCGCTGGCG CCGGCAACTC CGGCACGGTG TTCGCGGCCT TGCTGGCACC GGCACTGGCA
GCCGGCTTTG GCTGGAACAA TGTGTTCGGC TTTGCGCTGA TCCCGCTGTC ACTGGCGCTG
GTGGTGTTCG CCCTGTTGGC GCGCAATGCC CCGCAACGGC CCAAGCCGAA AGCCATGGCC
GACTACCTCA AGGCACTGGG CGACCGTGAC AGCTGGTGGT TCATGTTTTT CTACAGCGTG
ACCTTCGGCG GCTTCATCGG CCTGGCCAGC GCCCTGCCCG GCTACTTCAG CGACCAATAC
GGCCTGAGCC CGGTCACCGC CGGCTACTAC ACCGCCGCTT GCGTGTTCGC CGGCAGCCTG
ATGCGCCCGC TCGGCGGCGC CCTGGCTGAC CGTTTTGGCG GCATCCGCAC CCTGCTGGGC
ATGTACGGCG TGGCCGCCAT CTGCATTGCC GCAGTCGGCT TCAACCTGCC CTCTGCCGCG
GCCGCACTGG CGCTGTTCGT CAGCGCCATG CTCGGCCTGG GTGCCGGCAA TGGCGCAGTG
TTCCAACTGG TGCCACAACG CTTCCGCCAA GAGATCGGGG TAATGACCGG CCTGATCGGC
ATGGCCGGGG GCATCGGCGG CTTCCTGCTG GCGGCCGGGC TTGGCACCAT CAAGCAGCAC
ACTGGCGATT ACCAACTGGG GCTGTGGCTG TTCGCCAGCC TGGGCCTGCT GGCCTGGTTC
GGCCTGCACG GGGTGAAACA GCGCTGGCGC ACCACCTGGG GCTCGGCTGC AGTCACTGCA
GCACGGGTCT GA
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| Protein sequence | MSASFWKSGH VPTLFAAFLY FDLSFMVWYL LGPLAVQIAA DLQLSAQQRG LMVATPILAG
AILRFAMGVL VDRLSPKTAG LIGQVVVIVA LAAAWYLGVH SYEQALLLGV FLGFAGASFA
VSLPLASQWY PPQHQGKAMG IAGAGNSGTV FAALLAPALA AGFGWNNVFG FALIPLSLAL
VVFALLARNA PQRPKPKAMA DYLKALGDRD SWWFMFFYSV TFGGFIGLAS ALPGYFSDQY
GLSPVTAGYY TAACVFAGSL MRPLGGALAD RFGGIRTLLG MYGVAAICIA AVGFNLPSAA
AALALFVSAM LGLGAGNGAV FQLVPQRFRQ EIGVMTGLIG MAGGIGGFLL AAGLGTIKQH
TGDYQLGLWL FASLGLLAWF GLHGVKQRWR TTWGSAAVTA ARV
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