| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3586 |
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| Symbol | |
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| ID | 5192606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4000686 |
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| End bp | 4001927 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588041 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001268894 |
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| Protein GI | 148548792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.498861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAC CCTTGCCCAT CTTTATCGGC GCGCGCTACA CCCGAGCCAA GCGTCGCAAC
CACTTCATCT CGTTCATCTC CATGACTTCG ATGATCGGCC TGTCGCTGGG CGTGCTGGCG
ATGATCGTGG TGCTGTCGGT GATGAACGGC TTCCAGCGCG AAATGAGCTC GCGCATTCTC
GGCCTGGTGC CGCATGCCGC CATCCTGGGC GTGCAGCCGC TGGACGATTG GCACAAGGTG
GCCGACGCAG CCATGAAGAA TCCGGCGGTG ATGGCTGTGG CGCCGATTAC CGAGATGGAA
GGCATGCTGT CGTACAAGGG CGCCATGCAG CCGATCCAGG TGGGTGGTAT CGACCCGGCC
GAGGAGGGCA AGGTTTCCAT CGTTGGCCAG CACATCGTCC AGGGCCGCCT GCAGGGCTTG
CAGCCCGGTG AGTTCGGTGT GGTCATCGGT GAGCTGACCG CACGCCGCTT CCGCCTGAAC
ACCGGCGACA AGCTGACCTT GATCGTGCCG GAAATCAGCA AGGAACCGGG TGGCATCACC
CCGCGCATGC AGCGCCTCAC CGTGGTCGGC ATCTTCAAGG TCGGCGCCGA ACTGGATGGG
TCGCAGGCTT ATATCCATGT TGCTGATGCA GCTGAGATGC AGCGCTGGGC ACCAGGCCAG
GTGCAAGGTG TGCGGCTGAA GCTGCACGAC CTGTATGCCG CTCCGCAGGT GGCCAAGGCG
ATTGCTGCCG GGCTTGGGGA CGCCTACCGG GCCGATGACT GGTCGCATAC CCAGGGCAGC
CTGTTCAGCG CCATGAAGAT GGAAAAGACC ATGATCGGCC TGTTGCTGAT GATGATCATC
GCGGTCGCGG CGTTCAATAT CATCGCCACC CTGGTGATGG TGGTGAACGA CAAGGGGCCG
GACATTGCCA TCCTGCGTAC CTTGGGCGCC ACGCCGGCGC AGATCATGGG CACGTTCATG
GTCCAGGGCA GCCTGATCGG CATTGTCGGC ACGCTGATTG GTGGCGTACT GGGCGTGATT
GCGGCGTTCA ATGTGAGCCA GATCGTCGGC TGGCTGGAGC GGGTGAGCGG GCAGCACATC
TTTACGTCGG ATGTGTACTT CGTCAGCAGC TTGCCGTCGC AGTTGCAGTG GGGGGATGTG
GCGATCATCT GCACCGCCGG CCTGGTGATG AGTTTCCTGG CGACCATTTA CCCGGCCTAC
CGGGCGTCGC AGGTGCAGCC GGCGATTGGC CTGGCGGTTT GA
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| Protein sequence | MFRPLPIFIG ARYTRAKRRN HFISFISMTS MIGLSLGVLA MIVVLSVMNG FQREMSSRIL
GLVPHAAILG VQPLDDWHKV ADAAMKNPAV MAVAPITEME GMLSYKGAMQ PIQVGGIDPA
EEGKVSIVGQ HIVQGRLQGL QPGEFGVVIG ELTARRFRLN TGDKLTLIVP EISKEPGGIT
PRMQRLTVVG IFKVGAELDG SQAYIHVADA AEMQRWAPGQ VQGVRLKLHD LYAAPQVAKA
IAAGLGDAYR ADDWSHTQGS LFSAMKMEKT MIGLLLMMII AVAAFNIIAT LVMVVNDKGP
DIAILRTLGA TPAQIMGTFM VQGSLIGIVG TLIGGVLGVI AAFNVSQIVG WLERVSGQHI
FTSDVYFVSS LPSQLQWGDV AIICTAGLVM SFLATIYPAY RASQVQPAIG LAV
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