Gene Pput_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3555 
Symbol 
ID5192541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3973633 
End bp3974154 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID640588011 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_001268864 
Protein GI148548762 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.586954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG AACAACTAGC TGAGCTACGA GACCGCCTGC GGGCGGAAAA AGGGCAGGTA 
AAGGCCGAGA GCGCGAAACC GCCCAAGCGC AAGTCGCCCC CGCAGGCGAA GCCGCGTGAG
ATGGACCCGG CGGTGGCCGC GATCTGGCCA CTGCAAAAGC ATTTTCCCTT GGCTTTCCCG
GTCAACCCGG CCCCCAAGGT GCCGCTCAAG GAGGGCATTT TCAAGGATGC CGAGCAACAC
CTGGAGTTGC TTGGGTTAAC CCGTGAACAG CTCAAGCTGG GCATTTCCAC GTGGTGCCGG
GGCGCTCGAT ACTGGGCGAG CATGGTGGAG AATGCTCCGC GCCTTGACTT GAACGGTCAG
GCCGCGGGTA CTGTGACCGC CGCTCAGGCG CTGCATGCCA AGCAGCAGGC TGCGCGGCAA
CGCAGCCAGG ATCGACGCAA TCGTGCGAAG TCAAAGGCCC AGGCCCAGGC CCAGGCTCCG
GCCCCCGCCG CCGACACCGC AACGGTGCAG TCTACCGACT GA
 
Protein sequence
MGFEQLAELR DRLRAEKGQV KAESAKPPKR KSPPQAKPRE MDPAVAAIWP LQKHFPLAFP 
VNPAPKVPLK EGIFKDAEQH LELLGLTREQ LKLGISTWCR GARYWASMVE NAPRLDLNGQ
AAGTVTAAQA LHAKQQAARQ RSQDRRNRAK SKAQAQAQAP APAADTATVQ STD