Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3555 |
Symbol | |
ID | 5192541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3973633 |
End bp | 3974154 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588011 |
Product | ProQ activator of osmoprotectant transporter ProP |
Protein accession | YP_001268864 |
Protein GI | 148548762 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.586954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTTG AACAACTAGC TGAGCTACGA GACCGCCTGC GGGCGGAAAA AGGGCAGGTA AAGGCCGAGA GCGCGAAACC GCCCAAGCGC AAGTCGCCCC CGCAGGCGAA GCCGCGTGAG ATGGACCCGG CGGTGGCCGC GATCTGGCCA CTGCAAAAGC ATTTTCCCTT GGCTTTCCCG GTCAACCCGG CCCCCAAGGT GCCGCTCAAG GAGGGCATTT TCAAGGATGC CGAGCAACAC CTGGAGTTGC TTGGGTTAAC CCGTGAACAG CTCAAGCTGG GCATTTCCAC GTGGTGCCGG GGCGCTCGAT ACTGGGCGAG CATGGTGGAG AATGCTCCGC GCCTTGACTT GAACGGTCAG GCCGCGGGTA CTGTGACCGC CGCTCAGGCG CTGCATGCCA AGCAGCAGGC TGCGCGGCAA CGCAGCCAGG ATCGACGCAA TCGTGCGAAG TCAAAGGCCC AGGCCCAGGC CCAGGCTCCG GCCCCCGCCG CCGACACCGC AACGGTGCAG TCTACCGACT GA
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Protein sequence | MGFEQLAELR DRLRAEKGQV KAESAKPPKR KSPPQAKPRE MDPAVAAIWP LQKHFPLAFP VNPAPKVPLK EGIFKDAEQH LELLGLTREQ LKLGISTWCR GARYWASMVE NAPRLDLNGQ AAGTVTAAQA LHAKQQAARQ RSQDRRNRAK SKAQAQAQAP APAADTATVQ STD
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