| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3525 |
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| Symbol | |
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| ID | 5190730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3938525 |
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| End bp | 3940174 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587982 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001268835 |
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| Protein GI | 148548733 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.244199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG ATTACGCCGA GGCCGCTCGC ACGTTTGACC ATGACCAGGC CGTTGTGGCG
GCATTGCACG GCAACCTTGA AGCCCTTAAT GCCTGTGTCG AATGCTGTGA CCGCCATGCC
GGTGACGGCA AGCTGGCACT GATTCATGAA GACCGCGATG GTAACAGCGC GCGCTATAGC
TTCGATCAGC TTCAGGTGCA GGCTGCCCGG TTTGCCAATG TGCTAAAGGC GCAGGGGGTA
GGCGCAGGCG ACCGGGTTGC CGGCTTGATG CCGCGCACCC CCGAACTGTT GGTGACCATC
CTCGCTACCT GGCGCCTCGG GGCGGTCTAC CAGCCCTTGT TCACCGCGTT CGGCCCCAAG
GCCATCGAGC ACCGGCTTGA GCAATCCCAT GCCCGAGTGA TAGTCACCGA TAGCCACAAC
CGCGCCAAGC TGGACGATGT GCACGTCTGC CCGACCATCA TCACTGTCAA GGCCCGCAGT
GGTGAGCTGG ACTTCCAGCA ATGCCTGGAG CGCGCAGCGG ACGTATGTGA GCCGGTGATG
CGCTCAGGCA ACGATCCATT CCTGCTGATG TTCACTTCTG GAACCACTGG CCCGGCAAAA
CCCCTGGAAG TGCCACTGCG TGCGATCGTC GCGTTTCAGG GCTACATGCG TGATGCCATC
GAGCTGCTGC CCGAGGACAA CTTCTGGAAC CTGGCCGACC CGGGTTGGGC GTACGGCTTG
TATTACGCCG TTACCGGCCC ATTGTCGCTG GGGCATGCCA CCACGTTCTA CGATGGCCCG
TTCAGTGTCG AGAGCTGCGC CCGGGTGATC GACAAGCTGG GTATCACCAA CCTGGCCGGC
TCGCCGACCG CGTATCGCTT GCTGATTGCG GCGGGCAAAG ATTTTTCGGT ACCGATCAAG
GGCCGCCTGC GGGTGGTCAG CAGTGCCGGC GAACCGCTTA ACCCCGAGGT GATCCGCTGG
TTCGCCGACG AGCTGGGCGT GACCATTCAC GATCACTACG GCCAGACCGA ACTGGGCATG
GTGCTGTGCA ATCACCATGG TCTGCAGCAC CCGGTGCACC TGGGCTCTGC CGGCTATGCC
ATCCCCGGCC ACCGCATCGT GGTGCTGGAC GAGCAGGGCA ACGAGCGGCC AGCCGGCCAG
CCAGGCATCC TCGCCGTTGA CCGCGAGCAG TCGCCGCTAT GCTGGTTCGG TGGTTACCAC
GGCCTGCCGA CCAAAGCCTT CGTCGGCAAG TACTACCTCA GCGGCGACAC TGTCGAGCTG
AACCCGGATG GCAGCATCAG CTTCGTTGGC CGTAGCGACG ACGTGATCAC CACCTCCGGT
TACCGGGTGG GGCCGTTCGA TGTGGAAAGC GCGTTGATCG AGCACCCGGC GGTGATCGAA
GCCGCGGTGA TCGGCAAGCC CGACCCGGAG CGCACCGAGC TGATCAAGGC GTTCGTGGTA
TTGGCCAGCG GCTACGCCGG CAGCGTCGAG CTGGAAGAAA CCTTGCGCCA GCACGTGCGC
CAGCGCCTCT ACGCGCATGC CTACCCCAGG GAAATCGAAT TCGTCAGCGA GCTGCCCAAG
ACCCCGAGCG GCAAGCTCCA ACGCTTCATC CTGCGCAACC AGGAAGTCGC CAAACAACAA
GCGCAACAGG CCACCCCTGT CAGCGTCTGA
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| Protein sequence | MMRDYAEAAR TFDHDQAVVA ALHGNLEALN ACVECCDRHA GDGKLALIHE DRDGNSARYS
FDQLQVQAAR FANVLKAQGV GAGDRVAGLM PRTPELLVTI LATWRLGAVY QPLFTAFGPK
AIEHRLEQSH ARVIVTDSHN RAKLDDVHVC PTIITVKARS GELDFQQCLE RAADVCEPVM
RSGNDPFLLM FTSGTTGPAK PLEVPLRAIV AFQGYMRDAI ELLPEDNFWN LADPGWAYGL
YYAVTGPLSL GHATTFYDGP FSVESCARVI DKLGITNLAG SPTAYRLLIA AGKDFSVPIK
GRLRVVSSAG EPLNPEVIRW FADELGVTIH DHYGQTELGM VLCNHHGLQH PVHLGSAGYA
IPGHRIVVLD EQGNERPAGQ PGILAVDREQ SPLCWFGGYH GLPTKAFVGK YYLSGDTVEL
NPDGSISFVG RSDDVITTSG YRVGPFDVES ALIEHPAVIE AAVIGKPDPE RTELIKAFVV
LASGYAGSVE LEETLRQHVR QRLYAHAYPR EIEFVSELPK TPSGKLQRFI LRNQEVAKQQ
AQQATPVSV
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