| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3510 |
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| Symbol | |
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| ID | 5194086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3924415 |
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| End bp | 3927330 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587967 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001268820 |
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| Protein GI | 148548718 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00329797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCTTGA TAGTGCTATT GCTTCTGCCG TTCGTGGGCA GTTGCCTGGC AGCTGTGCTG
CCGCACAACG CACGTAACGC CGAGTCCATT CTTGCCGGGC TCGTAGCCCT GGTCGGCACC
GTCCAGGTAG CACTTCTGTA CCCTCAGATT GCCCATGGTG GCGTCATTCG CGAAGAGTTC
CTGTGGTTAC CCAGCCTGGG GCTGAACCTG GTGTTGCGCA TGGACGGCTT TGCCTGGCTG
TTCTCGTTGC TGGTACTGGG CATTGGCACG CTGGTATCGC TGTATGCGCG CTACTACATG
TCACCGCAAG ACCCGGTACC ACGCTTCTTC GCGTTCTTCC TGGCCTTCAT GGGCGCCATG
CTCGGCCTGG TCATCTCCGG CAACCTGATC CAACTGGTGT TCTTCTGGGA ACTGACCAGC
CTGTTCTCCT TCCTGCTGAT CGGCTACTGG CACCACCGCG CCGACGCCCG TCGCGGCGCC
TACATGGCGC TGATGGTAAC CGGTGCAGGC GGCTTGTGCC TGCTGGTAGG GGCCCTGCTG
CTCGGCCATG TGGTCGGCAG CTATGACCTG GACAAGGTCC TGGCTGCCGG GCATACCATC
CGCCAGCATG CGCTTTACCC GGTGCTGCTG CCCCTGATAC TCATCGGCGC CCTGACCAAG
AGCGCACAGT TTCCCTTCCA GTTCTGGCTG CCCCACGCCA TGGCAGCGCC CACACCGGTG
TCGGCCTATT TGCATTCGGC CACCATGGTC AAGGCCGGGG TGTTCCTGCT GGCACGCCTG
TGGCCGGTAC TCTCCGGTAG CGAGGAGTGG TTCTGGATCG TCGGCGGTGC CGGCGCCCTC
ACCCTGCTGC TCGGCGCTTT CGCCGCCATG TTCCAAAATG ACCTCAAGGG CCTGCTGGCC
TATTCGACCA TCAGCCACCT GGGCCTGATT ACCCTGCTGC TGGGCCTTAA CAGCCCGCTG
GCTGCCGTCG CCGCGGTATT CCACATTCTC AACCATGCCA CCTTCAAGGC CTCGCTGTTC
ATGGCCGCCG GCATCATCGA CCACGAGAGC GGCACCCGTG ACATTCGCCG CCTCAGCGGC
CTGATCCGCC TGGTGCCCTA CACCGCGACC CTGGCCATGG TCGCCAGCGC CTCGATGGCC
GGCGTGCCGC TGATGAACGG CTTCCTGTCG AAGGAAATGT TCTTCGCCGA AACGGTATTC
ATCAGCTCCA CCGCCTGGGT CGAGGCCACG CTGCCGGTGA TCGCCACCCT GGCCGGCACC
TTCAGCGTGG CGTATGCCCT GCGCTTTACC GTCGATGTGT TCTTCGGGCC GACGGCCCAG
GACCTGCCCC ATACCCCGCA CGAGCCGCCA CGCTGGATGC GTGCTCCGGT GGAACTGCTG
GTGCTCACGT GCCTGGTCGT GGGCATCTTC CCCACACAGT CGGTCGGCCC CCTGTTGGCC
GCTGCGGCCC TGCCGGTGGT TGGCGGCACC CTGCCGGAAT ACAGCCTGGC CATCTGGCAT
GGCTGGAACG CGCCGATGAT CATGAGCCTG GTCGCCATGA GCGGCGGCAT CGTCCTGTAC
CTGTTGCTGC GCAAACAACT GCGCCTGGGT CGCTTCCCCT ACCCGCCCGT GATCGAGCGC
TTCAATGGCA AGCGGCTGTT CGAGCACGGC CAGGTTCACC TGATGTTGCT GGCGCGTCGC
ATCGAACGCC TGTTCACCAC CCGGCGGCTG CAGTCGCAGC TGTTCATGCT GGTATTCGCC
GCGTTCCTCG CGGGCCTCAC GCCGATGCTC CATAGCGGCC TGAGCTGGGG TGATCGCCCG
AAGATTCCGG GTTCCGGTGT ATTCGTCGCC CTGTGGCTGA TCGCCATTGC CTGCGCCATC
GGCGCCGCCT ACCAGGCCAA GTACCACCGC CTGGCGGCAC TGATCATGGT CAGCGTCTGC
GGCCTGATGA CCTGCATCAC CTTCGTCTGG TTCTCTGCGC CCGACCTGGC ACTGACCCAG
TTGGTGGTGG AAGTGGTCAC CACCGTGCTG ATCCTGCTCG GCCTGCGCTG GCTGCCACGG
CGTATCGAAG GCGTGTCACC GCTGCCGGGT AGCCTGGAGC GCGCGCGCAT GCGCCGCCTG
CGCGACTTGC TGCTGGCCGT GCTGGTGGGT GGCGGCATGG CCGTGCTGTC GTACGCCATG
CTGACCCGAC CCACGCCCAA CGACATTTCC TCGTTCTATT TGAGCCGTGC GTTGCCTCAG
GGCGGCGGCA CCAATGTGGT CAATGTCATG CTGGTCGACT TCCGCGGCTT CGATACCCTC
GGTGAAATCA CCGTGTTGGT GGCTGTGGCA CTGACGGTGT TCGCCCTGCT ACGGCGCTTC
CGTCCTCCAA AAGAGAGCAT GCAGCTGCCG GCGCAACAAC GCCAGCTGGC GCCGGACGTA
GTCACCGACC TGATCAACCC GCGGCATGCC ACCGATACCG CGCTGGGCTT CATGATGGTG
CCGGCAGCGC TGGTGCGCCT GCTGCTGCCG ATCGCCTTGC TGGTGTCGAT GTACCTGTTC
ATGCGCGGGC ACAACCAGCC CGGTGGCGGG TTTGTCGCTG GCTTGGTCAT GTCGGTGGCG
TTCATCCTCC AGTACATGGT GGCCGGCACC CAGTGGGTCG AGGCGCAGAT GAGCCTGCGG
CCGCTGCGCT GGATGGGTAC CGGGCTGCTG TGCGCGACCC TGACCGGCGT CGGCGCCATG
CTGCTGGGTT ACCCGTTCCT CACCACCCAT ACCGCCCACT TGCACCTGCC GTTGCTGGGT
GATGTGCACG TGGCCAGCGC GCTGTTCTTC GATATTGGCG TATACACCGT CGTGGTCGGC
TCGACCCTGC TGATCCTCAC GGCCCTGGCG CACCAGTCGG TGCGCGCCTA CCGCCCGGGC
AACCCGGCAA AAACCAGCCA AGCAGGAGCC GCCTGA
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| Protein sequence | MSLIVLLLLP FVGSCLAAVL PHNARNAESI LAGLVALVGT VQVALLYPQI AHGGVIREEF
LWLPSLGLNL VLRMDGFAWL FSLLVLGIGT LVSLYARYYM SPQDPVPRFF AFFLAFMGAM
LGLVISGNLI QLVFFWELTS LFSFLLIGYW HHRADARRGA YMALMVTGAG GLCLLVGALL
LGHVVGSYDL DKVLAAGHTI RQHALYPVLL PLILIGALTK SAQFPFQFWL PHAMAAPTPV
SAYLHSATMV KAGVFLLARL WPVLSGSEEW FWIVGGAGAL TLLLGAFAAM FQNDLKGLLA
YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRRLSG
LIRLVPYTAT LAMVASASMA GVPLMNGFLS KEMFFAETVF ISSTAWVEAT LPVIATLAGT
FSVAYALRFT VDVFFGPTAQ DLPHTPHEPP RWMRAPVELL VLTCLVVGIF PTQSVGPLLA
AAALPVVGGT LPEYSLAIWH GWNAPMIMSL VAMSGGIVLY LLLRKQLRLG RFPYPPVIER
FNGKRLFEHG QVHLMLLARR IERLFTTRRL QSQLFMLVFA AFLAGLTPML HSGLSWGDRP
KIPGSGVFVA LWLIAIACAI GAAYQAKYHR LAALIMVSVC GLMTCITFVW FSAPDLALTQ
LVVEVVTTVL ILLGLRWLPR RIEGVSPLPG SLERARMRRL RDLLLAVLVG GGMAVLSYAM
LTRPTPNDIS SFYLSRALPQ GGGTNVVNVM LVDFRGFDTL GEITVLVAVA LTVFALLRRF
RPPKESMQLP AQQRQLAPDV VTDLINPRHA TDTALGFMMV PAALVRLLLP IALLVSMYLF
MRGHNQPGGG FVAGLVMSVA FILQYMVAGT QWVEAQMSLR PLRWMGTGLL CATLTGVGAM
LLGYPFLTTH TAHLHLPLLG DVHVASALFF DIGVYTVVVG STLLILTALA HQSVRAYRPG
NPAKTSQAGA A
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