Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3509 |
Symbol | |
ID | 5194085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3923315 |
End bp | 3924265 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587966 |
Product | hypothetical protein |
Protein accession | YP_001268819 |
Protein GI | 148548717 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0160994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC CCAGCAGCAA GCCTACCCCT GCCGTCACCT TCCGCCTGAG CAAGGCCGAA CTGGTGCTGG TATTCATCAC CATGTTGTGG GGCGGCACTT TCCTGTTGGT GCATAACGTG ATGACCGTCA GCGGCCCGAT GTTCTTCGTC GGCCTGCGTT TTGCGGCAGC CGCGCTGTTC GTTGGTGTGG TCTCGGCGCG AGCGCTGCCC GGCCTGACCT TCACCGAACT GAAGGCCGGC ATGCTGATCG GCGTGTCGAT CATGCTCGGC TATGGCCTGC AGACCATGGG CCTGCAAACC ATCAGCAGCA GCCAGTCAGC GTTCATCACT GCGCTGTACG TCCCGTTCGT GCCGCTGCTG CAGTGGCTGG TGCTGGGGCG GCGGCCTGGC CTGATGCCCA GCATGGGTAT CTGCCTGGCA TTCATCGGCC TGATGCTGCT GGCCGGGCCG GAAGGCGGCA GCCTGCGTTT CAGCGAGGGC GAACTGGTCA CCCTGATCAG CGCCGTGGCC ATCGCCGGTG AAATCATTCT GATCAGCCGC TACGCCGGTC AGGTCGATGT GCGCCGGGTT ACGGTGGTGC AACTTGCGAC CGCATCGCTG CTGGCGTTTC TCATGATCGT GCCGACCCAG GAGCGCCTCC CCGACTTCTC CTGGCTGTTG CTTGCCAGCG CAGTGGGCCT GGGCGCAATG AGTGCGGTGA TCCAAGTGGC AATGAACTGG GCACAGAAGT CGGTCTCGCC TACCCGCGCC ACACTCATCT ATGCCGGTGA ACCGGTGTGG GCCGGCATCG TCGGGCGTCT GGCTGGCGAG CGCCTGCCTG GCGTGGCGCT GCTCGGCGGC CTGCTGATCG TGGTTGCCGT GGTGGTCAGT GAACTCAAGG TGCGACGCCC TCGCGAAACC GTCGAAACAC GCGATGTGCA GAACCCAGGC GAAGGCCAGG CGGGGCTGTA A
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Protein sequence | MNQPSSKPTP AVTFRLSKAE LVLVFITMLW GGTFLLVHNV MTVSGPMFFV GLRFAAAALF VGVVSARALP GLTFTELKAG MLIGVSIMLG YGLQTMGLQT ISSSQSAFIT ALYVPFVPLL QWLVLGRRPG LMPSMGICLA FIGLMLLAGP EGGSLRFSEG ELVTLISAVA IAGEIILISR YAGQVDVRRV TVVQLATASL LAFLMIVPTQ ERLPDFSWLL LASAVGLGAM SAVIQVAMNW AQKSVSPTRA TLIYAGEPVW AGIVGRLAGE RLPGVALLGG LLIVVAVVVS ELKVRRPRET VETRDVQNPG EGQAGL
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