| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3498 |
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| Symbol | |
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| ID | 5194191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3907559 |
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| End bp | 3909406 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587950 |
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| Product | ABC transporter |
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| Protein accession | YP_001268808 |
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| Protein GI | 148548706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.661743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGCT CGCGGAAATA CTCAGCACGG ATACTTACCA TGGAAATGAA CTGGCATCAG
GCCCTGCAAG AGAGCCTAAG CTGGCTGGCA ATCGCCTCGT TCATCACCCT TGTCAGCTTC
ACCGCAGCCG CAACTCTGGC CGTAAGTTGT ACACGCTGGG GCAGCCAGTT CTGGCAGCTT
GCCGGGCCCT ATTTCAGTTT CAGGCGCAGT TGGCGGCCGT TGCTGGTGTT TGCCCTGCTG
CTGGTCCTGA CGCTGTTTTC GGTTCGCCTG AACGTGCTGT TTTCGTTTTG GTACAACGGC
TTCTACAGCG CCTTGCAGGG CCTTGACCAA GCGGCGTTCT GGTACCTGCT CGGCGTCTTC
GGGGTGCTGG CCACCATCCA TGTGCTGCGC TCGCTGTTCA CCTTCTATGT AAGCCAGGCA
TTCAGTATCA AGTGGCGGGT CTGGCTGACC GAGCGCCTGA CCCACGACTG GATGCAGGGC
GATGCCTATT ACCGTGGCCA GTTCCTTGCC GAGCCAGTGG ACAACCCTGA CCAACGTATC
GAACTGGACG TTAACGCTTT CGTCACCAAC TCGGTCACCC TTGCCCTAGG CGCAGTCAGT
GCGCTGGTTT CGCTGGTGGC GTTCACCGGC ATCCTCTGGG GGTTGTCGGC ACCGTTGACG
GTGGCCGGCG TAGAGATCCC TCGGGCGATG GTATTTGCCG TTTACCTGTA TGTCATCGTC
GCCACTTGGG TCGCCTTCCG TCTTGGGCGC CCGTTGATCC GGCTTAACTT CCTCAACGAG
AAACTCACCG CCAACTTCCG TTACGCATTG ATGCGTCTGC GTGAGAACGC TGAGAACATT
GCCTTCTACC AAGGTTCGCA AGTCGAGCGG GGCACGTTGC TCGGCCGTTT TGCTGCCTTG
ATCGTGAATG CCTGGGCATT GGTGTACCGG AACTTGAAGT TCAGTGGCTT CAACTTGGGT
GTCAGTCAGG TGGCCGTTGT GTTTCCGTTC ATTCTTCAGG CGCCGCGCTT CTTCAGTGGG
GCGATCAAGC TGGGCGACGT CATGCAAACT TCCCAGGCCT TTGGGCAGGT GCAGGATTCT
TTGTCGTTCT TCCGTGAGTC GTACGATGCG TTCGCGCAGT ACCGCGCGAC CCTTGACCGT
CTCACCGGCT TTCTCGATGC CAACCAGCAG GCAAGTGCGT TGCCGCGCGT CACGACCGAA
GACCAGGCGC ATGCGCTGCA GATTGCGGGA TTACAGGTAC TGCGCCCGGA CGGACATGCC
CTTATCGCCG ACCTGGACCT GAGCCTGCAC GCCGGTCAGG CGTTGTTGAT CAAAGGGCCA
TCGGGCAGTG GTAAAACCAC GCTGCTGCGT GCCCTGGCGG GCCTTTGGCC GTATGCCGAA
GGCAAGGTCA GGCGGCCAAC GGGGCATCAG GCACTGTTCC TGTCGCAACG CCCGTACCTG
CCGCTGGGTG ACTTGCGTAC CGTCATTGCC TACCCGGCAG CCAGCAATTC CAAGGATGAG
TTGCTCATGC AGCAGGCATT GCGCCAGGTC AACCTGGCCC ACCTGGCCGA GCGTCTGGAC
GTCAGCTGTG ACTGGTCACA CATCCTCTCG GTGGGCGAGC AGCAGCGTCT GGCGTTCGCC
CGGGTACTGT TCAACCGGCC TGAGGTGGTG TTTCTCGACG AGTCCACCTC GGCGATGGAT
GAGGGGCTCG AGCATGCCCT GTATGCGTTG TTGCGCTCGG AAATGCCAAG TGCATTGCTG
GTCAGTGTCG GCCACCGCAG CACGCTGGCA GCGTTCCATA CTCACCGGCT TGAGGTGGAT
GGGCATGGCG TTTGGTCGTT GCTGGAGCAG GAGGCTGCGC TGGCCTAG
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| Protein sequence | MLRSRKYSAR ILTMEMNWHQ ALQESLSWLA IASFITLVSF TAAATLAVSC TRWGSQFWQL
AGPYFSFRRS WRPLLVFALL LVLTLFSVRL NVLFSFWYNG FYSALQGLDQ AAFWYLLGVF
GVLATIHVLR SLFTFYVSQA FSIKWRVWLT ERLTHDWMQG DAYYRGQFLA EPVDNPDQRI
ELDVNAFVTN SVTLALGAVS ALVSLVAFTG ILWGLSAPLT VAGVEIPRAM VFAVYLYVIV
ATWVAFRLGR PLIRLNFLNE KLTANFRYAL MRLRENAENI AFYQGSQVER GTLLGRFAAL
IVNAWALVYR NLKFSGFNLG VSQVAVVFPF ILQAPRFFSG AIKLGDVMQT SQAFGQVQDS
LSFFRESYDA FAQYRATLDR LTGFLDANQQ ASALPRVTTE DQAHALQIAG LQVLRPDGHA
LIADLDLSLH AGQALLIKGP SGSGKTTLLR ALAGLWPYAE GKVRRPTGHQ ALFLSQRPYL
PLGDLRTVIA YPAASNSKDE LLMQQALRQV NLAHLAERLD VSCDWSHILS VGEQQRLAFA
RVLFNRPEVV FLDESTSAMD EGLEHALYAL LRSEMPSALL VSVGHRSTLA AFHTHRLEVD
GHGVWSLLEQ EAALA
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