Gene Pput_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3466 
Symbol 
ID5191577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3870051 
End bp3870323 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content59% 
IMG OID640587914 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001268776 
Protein GI148548674 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.360259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000212777 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAGT CGGAACTGAT TGACGCTATC GCCGCATCTG CAGACATCCC GAAAGCTGTA 
GCCGGCCGTG CGCTGGACGC AGTCATCGAA TCCGTCACCG GCGCCCTGAA GCAAGGTGAC
GATGTGGTAC TGGTTGGCTT TGGTACCTTC TCGGTCAAGG AGCGCGCCGA GCGTACCGGC
CGCAACCCGC AAACCGGCAA GGCAATCAAG ATCGAAGCCG CCAAGGTTCC AGGTTTCAAG
GCAGGCAAAG GCCTGAAAGA CGCCGTCAAC TAA
 
Protein sequence
MNKSELIDAI AASADIPKAV AGRALDAVIE SVTGALKQGD DVVLVGFGTF SVKERAERTG 
RNPQTGKAIK IEAAKVPGFK AGKGLKDAVN