| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3452 |
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| Symbol | |
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| ID | 5194918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3855404 |
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| End bp | 3856090 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587900 |
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| Product | ABC transporter related |
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| Protein accession | YP_001268762 |
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| Protein GI | 148548660 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0356163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000197884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCCA GCATTCTCGT TGCGCAGAAC CTTAGCAAAG TGGTCCCCAG CGCGGAAGGT
GACCTTACCA TCCTCCACGC ACTGTCTCTC GACCTGGCCC AAGGCGATAG CCTGGCCATC
GTCGGCGCCT CGGGCTCTGG CAAGTCGACC CTGCTCGGTT TGCTCGCCGG CCTCGACCGC
CCCAGCGCTG GCAATGTCGT GCTCGCCGGC CACGACCTGG GGCCACTGGA TGAAGACCAA
CGCGCCCGTG TGCGCGCCGA ACATGTGGGT TTCGTGTTCC AGTCGTTCCA GCTGCTCGAC
AGCCTCAATG CACTGGAAAA CGTCATGCTG CCACTGGAGC TGGACGGCCG CCGCGATGCC
CGCGAACAGG CTCGCACTTT GCTGGAGCGG GTCGGCCTGG GCAAGCGCCT GAGCCACACA
CCTCGGCAGC TGTCGGGCGG CGAGCAGCAG CGCGTGGCAA TCGCCCGCGC CTTCGCCGCG
CAGCCTGCGG TGCTGTTCGC CGATGAGCCC ACCGGCAACC TCGACAGCCA CACCGGCGAA
CGCATCAGCG ACTTGTTGTT CGAGCTGAAC AAGGAGCGCG GCACTACCTT GGTGCTGGTC
ACCCATGACG AACGCCTGGC CCGCCGCTGC CGGCGCCAGA TCCGCCTGGA CGCGGGCCGC
CTTGTGGCGC CGATGGAGGC CCGGTGA
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| Protein sequence | MSPSILVAQN LSKVVPSAEG DLTILHALSL DLAQGDSLAI VGASGSGKST LLGLLAGLDR
PSAGNVVLAG HDLGPLDEDQ RARVRAEHVG FVFQSFQLLD SLNALENVML PLELDGRRDA
REQARTLLER VGLGKRLSHT PRQLSGGEQQ RVAIARAFAA QPAVLFADEP TGNLDSHTGE
RISDLLFELN KERGTTLVLV THDERLARRC RRQIRLDAGR LVAPMEAR
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